Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 NAMPTP1-201ENST00000440465 2514 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AL157713.1-201ENST00000379752 1531 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AC138915.3-201ENST00000562908 1389 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 RNU6-1085P-201ENST00000363576 107 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 TMSB4XP8-201ENST00000402089 135 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 KRT18P52-201ENST00000404956 846 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 RN7SKP236-201ENST00000410635 284 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AMD1P2-201ENST00000412936 992 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 TMSB4XP6-201ENST00000415187 135 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC114814.2-201ENST00000419195 485 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 TMSB4XP1-201ENST00000424567 135 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 DPY19L1P2-201ENST00000426647 915 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 BX890604.2-201ENST00000427883 474 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC099344.1-201ENST00000433548 492 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AL354983.1-201ENST00000434580 906 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 BMS1P10-201ENST00000443754 1120 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC108463.1-201ENST00000450258 347 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 RPL36AP55-201ENST00000454114 305 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 RN7SL58P-201ENST00000473445 294 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 CEACAMP3-202ENST00000483806 638 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC073610.1-201ENST00000489971 396 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 RN7SL37P-201ENST00000490461 307 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 KCTD9P5-201ENST00000504141 1170 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 SUMO2P17-201ENST00000504438 285 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 HMGB1P28-201ENST00000507778 552 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC048346.1-201ENST00000510247 144 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 RFPL4AP3-201ENST00000515267 345 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 CHCHD3P2-201ENST00000550751 639 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 EXOSC3P2-201ENST00000594464 497 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 PRELID3BP8-201ENST00000604148 295 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC103564.3-201ENST00000621194 220 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC027506.1-201ENST00000621395 198 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AC093909.6-201ENST00000624757 775 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 VEZF1P1-201ENST00000423931 1541 ntBASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHB11Q9Y5F2 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.44□□□□□ -1.22
PCDHB11Q9Y5F2 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms