Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RPL7L1P9-201ENST00000431298 745 ntBASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 NOP56P2-201ENST00000447491 769 ntBASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 RN7SL222P-201ENST00000476452 299 ntBASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 RPS12P31-201ENST00000491419 398 ntBASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 AC099654.6-201ENST00000636487 512 ntBASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 AC079298.1-201ENST00000625026 1619 ntBASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.24□□□□□ -1.25
NPC1L1Q9UHC9 ALB-202ENST00000401494 1659 ntTSL 5 BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 SNORA67-201ENST00000384423 137 ntBASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 GPS2P1-201ENST00000411761 986 ntBASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 REG1CP-206ENST00000447469 496 ntBASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 RN7SL826P-201ENST00000479724 288 ntBASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 AC093763.2-201ENST00000505334 1223 ntBASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 HMGN1P9-201ENST00000515212 298 ntBASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 AC022360.1-201ENST00000521058 340 ntBASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 MIR7155-201ENST00000615925 56 ntBASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 AC008115.4-201ENST00000619780 775 ntBASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 NLRP3P1-201ENST00000622303 1785 ntBASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
NPC1L1Q9UHC9 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 OR9G4-201ENST00000302957 984 ntBASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 EI24P4-201ENST00000423683 1078 ntBASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 GAPDHP14-201ENST00000450472 937 ntBASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 RPS23P1-201ENST00000491662 432 ntBASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 NDUFA5P12-201ENST00000503796 343 ntBASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 GMFG-202ENST00000594700 397 ntTSL 2 BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 AC005252.1-201ENST00000604518 1063 ntBASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 AC037198.3-201ENST00000616754 526 ntBASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 MIR6839-201ENST00000620425 113 ntBASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 SAMMSON-227ENST00000642114 1199 ntBASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 AL033543.1-201ENST00000623440 13454 ntBASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 AC140134.1-201ENST00000511830 3544 ntBASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 PANDAR-201ENST00000629595 1506 ntBASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 AC083837.1-201ENST00000565297 2994 ntBASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC7.22□□□□□ -1.25
NPC1L1Q9UHC9 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.25
NPC1L1Q9UHC9 AL353796.1-201ENST00000561542 3241 ntBASIC7.21□□□□□ -1.25
NPC1L1Q9UHC9 RPL35AP24-201ENST00000413846 330 ntBASIC7.21□□□□□ -1.25
NPC1L1Q9UHC9 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
NPC1L1Q9UHC9 RPS27P18-201ENST00000431701 247 ntBASIC7.21□□□□□ -1.25
NPC1L1Q9UHC9 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
NPC1L1Q9UHC9 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC7.21□□□□□ -1.25
NPC1L1Q9UHC9 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.21□□□□□ -1.25
NPC1L1Q9UHC9 AC006427.1-201ENST00000514359 712 ntBASIC7.21□□□□□ -1.25
NPC1L1Q9UHC9 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
NPC1L1Q9UHC9 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.21□□□□□ -1.25
NPC1L1Q9UHC9 AC009027.1-201ENST00000604510 479 ntBASIC7.21□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms