Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 MIR8075-201ENST00000614354 80 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC018926.3-201ENST00000618841 406 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC026634.1-201ENST00000634369 198 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC110994.2-201ENST00000635481 492 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC006453.3-201ENST00000635891 377 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AL512353.3-201ENST00000417517 1326 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC006058.1-201ENST00000568686 5067 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC125232.1-201ENST00000452554 1408 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 RN7SKP184-201ENST00000362348 333 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AMD1P2-201ENST00000412936 992 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 EIF4A1P10-201ENST00000428832 1216 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 RPL14P5-201ENST00000436474 730 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AL161454.1-201ENST00000446226 569 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 ST13P21-201ENST00000453250 1098 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 RPL26P30-201ENST00000453533 435 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC005165.2-201ENST00000466070 380 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 RPL21P42-201ENST00000488408 464 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC007182.2-201ENST00000489251 402 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AL035404.1-201ENST00000497982 568 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC008629.2-201ENST00000503783 483 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC093809.1-201ENST00000509155 340 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC130366.1-201ENST00000526505 1192 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 DUX4L52-201ENST00000549363 777 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 SKA2-203ENST00000578105 689 ntTSL 2 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC011840.5-201ENST00000582125 771 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AL161729.3-201ENST00000603533 673 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC012507.3-201ENST00000603556 477 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AL390058.1-201ENST00000603834 629 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC006335.3-201ENST00000613408 292 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC135068.11-201ENST00000636378 921 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 XIST-206ENST00000434839 2865 ntTSL 5 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AC007938.1-201ENST00000562524 2902 ntBASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LIMD1Q9UGP4 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC7.97□□□□□ -1.13
LIMD1Q9UGP4 SOCS5P5-201ENST00000402732 1586 ntBASIC7.97□□□□□ -1.13
LIMD1Q9UGP4 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LIMD1Q9UGP4 BRAFP1-201ENST00000445336 2703 ntBASIC7.97□□□□□ -1.13
LIMD1Q9UGP4 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.97□□□□□ -1.13
LIMD1Q9UGP4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
LIMD1Q9UGP4 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LIMD1Q9UGP4 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC7.97□□□□□ -1.13
LIMD1Q9UGP4 AC023886.2-201ENST00000321285 411 ntBASIC7.97□□□□□ -1.13
LIMD1Q9UGP4 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LIMD1Q9UGP4 SNORA73B-201ENST00000363217 204 ntBASIC7.97□□□□□ -1.13
LIMD1Q9UGP4 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms