Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RNA5SP485-201ENST00000365053 119 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 SNORD116-9-201ENST00000384000 95 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 SNORD116-3-201ENST00000384287 95 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 SNORD116-7-201ENST00000384404 95 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 SNORD116-5-201ENST00000384462 95 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 Y_RNA.578-201ENST00000390903 88 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 MTCO1P56-201ENST00000401674 224 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 MTCO3P30-201ENST00000426425 670 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 MTND1P20-201ENST00000430341 950 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC005189.1-201ENST00000431286 310 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC013403.1-201ENST00000436954 263 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 GSTA7P-201ENST00000438425 448 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AL157827.1-201ENST00000447622 132 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AL133217.1-201ENST00000450980 425 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 CCNJP2-201ENST00000457810 1163 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 RPS27AP16-201ENST00000492222 470 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 OR2A20P-203ENST00000498397 1268 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC008055.1-201ENST00000547032 609 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 TPRX1P1-201ENST00000557620 319 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AP001094.1-201ENST00000579805 193 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC063977.7-201ENST00000594454 337 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AL583832.1-201ENST00000603227 784 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 NDUFB9P1-201ENST00000604683 510 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC073046.2-201ENST00000604756 527 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC010245.2-201ENST00000606908 1167 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC026585.1-201ENST00000619582 524 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 LINC02211-204ENST00000642024 1070 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AC007342.7-201ENST00000624610 2337 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 LINC01613-201ENST00000561476 2780 ntBASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.62□□□□□ -1.35
PPARGC1AQ9UBK2 AP000547.3-204ENST00000588548 2523 ntBASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 MTND4P5-201ENST00000435821 1374 ntBASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 RNU6-224P-201ENST00000384055 107 ntBASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 PRELID1P1-201ENST00000403549 660 ntBASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 SFR1P1-201ENST00000403720 688 ntBASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 CDY17P-201ENST00000414121 1282 ntBASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 AL008987.1-201ENST00000415528 237 ntBASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 ELOCP9-201ENST00000418624 239 ntBASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 AL157884.1-201ENST00000424561 454 ntBASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 CDY8P-201ENST00000428380 1279 ntBASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 CDY20P-201ENST00000447528 1279 ntBASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 VN1R38P-201ENST00000450265 887 ntBASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 RN7SL39P-201ENST00000462264 297 ntBASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.61□□□□□ -1.35
PPARGC1AQ9UBK2 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms