Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC015982.1-201ENST00000608113 465 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 AL390318.1-201ENST00000624564 687 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 AC005618.4-201ENST00000625053 554 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 YES1P1-201ENST00000418510 1628 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 AC114786.1-201ENST00000512892 1415 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AC015799.1-201ENST00000622996 3122 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 RPS29P14-201ENST00000431518 171 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 LINC02210-201ENST00000444561 288 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 SEPT7P3-201ENST00000455017 621 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 NXT1P1-201ENST00000458481 316 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 RN7SL72P-201ENST00000460697 269 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 EIF2S2P4-201ENST00000461070 984 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 RN7SL583P-201ENST00000475692 287 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AC025181.1-201ENST00000477507 416 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 RNU6-760P-201ENST00000516078 97 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 OR8Q1P-201ENST00000526467 655 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 OR5AM1P-201ENST00000532136 1032 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AL358913.1-201ENST00000554342 121 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AC010547.6-201ENST00000571789 193 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AC073575.2-201ENST00000614212 627 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 MTCO1P15-201ENST00000529569 1526 ntBASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BLOC1S4Q9NUP1 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 LINC01963-201ENST00000562038 3148 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 RNA5SP46-201ENST00000362370 120 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AC104297.1-201ENST00000393779 870 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 OOSP1-201ENST00000398992 1270 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 BX276092.6-201ENST00000430476 250 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 FMO7P-201ENST00000436045 768 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AC064862.4-201ENST00000442180 334 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AP000281.1-201ENST00000444036 316 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 EEF1B2P6-201ENST00000445713 673 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 BX276092.8-201ENST00000455722 250 ntBASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.22□□□□□ -1.41
BLOC1S4Q9NUP1 AC021106.1-201ENST00000509020 1058 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms