Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC017002.4-201ENST00000604721 1525 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 AC027279.4-201ENST00000624371 2072 ntBASIC6.96□□□□□ -1.3
PDLIM7Q9NR12 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC010401.2-201ENST00000575137 4934 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AP000866.6-201ENST00000638898 3579 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 RNA5SP333-201ENST00000363466 118 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 RNU1-49P-201ENST00000363468 159 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 RNA5SP478-201ENST00000364657 115 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 RNA5SP334-201ENST00000364825 118 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 SNORD116-9-201ENST00000384000 95 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 SNORD116-3-201ENST00000384287 95 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 SNORD116-7-201ENST00000384404 95 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 SNORD116-5-201ENST00000384462 95 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 QRSL1P2-201ENST00000418582 964 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 Z84478.1-201ENST00000438230 1219 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 RPL31P20-201ENST00000449593 360 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AL445665.1-202ENST00000452436 324 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 PTGES3P5-201ENST00000455109 434 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 RPS3AP22-201ENST00000488297 769 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC010306.1-201ENST00000523223 1117 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 MIR1273E-201ENST00000581165 102 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC012213.4-201ENST00000606457 354 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 OR51C1P-201ENST00000608504 942 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC004948.1-201ENST00000609858 672 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC092106.3-201ENST00000611308 722 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 MIR6730-201ENST00000622213 67 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC090897.3-201ENST00000636973 1157 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 PSG10P-201ENST00000501199 1500 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 BIN2P1-201ENST00000504996 1530 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 AC022819.1-201ENST00000563495 3910 ntBASIC6.95□□□□□ -1.3
PDLIM7Q9NR12 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 PABPC1P8-201ENST00000452851 2086 ntBASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 RNU1-150P-201ENST00000362491 162 ntBASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 RNU6-481P-201ENST00000384194 107 ntBASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 AP002784.2-201ENST00000397300 549 ntBASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 RANP4-201ENST00000413361 655 ntBASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 HMGB1P49-201ENST00000418882 569 ntBASIC6.94□□□□□ -1.3
PDLIM7Q9NR12 PRELID3BP10-201ENST00000431957 584 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms