Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
UPF2Q9HAU5 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
UPF2Q9HAU5 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.59□□□□□ -1.36
UPF2Q9HAU5 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.58□□□□□ -1.36
UPF2Q9HAU5 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 FAM183DP-201ENST00000421987 399 ntBASIC6.58□□□□□ -1.36
UPF2Q9HAU5 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 AC012512.1-201ENST00000446594 718 ntBASIC6.58□□□□□ -1.36
UPF2Q9HAU5 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 AP003033.2-201ENST00000528901 805 ntBASIC6.58□□□□□ -1.36
UPF2Q9HAU5 AP000648.1-201ENST00000529682 397 ntBASIC6.58□□□□□ -1.36
UPF2Q9HAU5 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 SETP3-201ENST00000581726 813 ntBASIC6.58□□□□□ -1.36
UPF2Q9HAU5 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 AL031601.1-201ENST00000605702 394 ntBASIC6.58□□□□□ -1.36
UPF2Q9HAU5 MIR6839-201ENST00000620425 113 ntBASIC6.58□□□□□ -1.36
UPF2Q9HAU5 AP003400.3-201ENST00000624904 346 ntBASIC6.58□□□□□ -1.36
UPF2Q9HAU5 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
UPF2Q9HAU5 AC114947.2-201ENST00000565748 2125 ntBASIC6.58□□□□□ -1.36
UPF2Q9HAU5 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 RN7SKP6-201ENST00000364795 319 ntBASIC6.57□□□□□ -1.36
UPF2Q9HAU5 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 AL121878.1-201ENST00000418638 859 ntBASIC6.57□□□□□ -1.36
UPF2Q9HAU5 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 AC068491.1-201ENST00000449539 1241 ntBASIC6.57□□□□□ -1.36
UPF2Q9HAU5 SEPT14P1-201ENST00000458703 648 ntBASIC6.57□□□□□ -1.36
UPF2Q9HAU5 AC092754.1-201ENST00000472975 479 ntBASIC6.57□□□□□ -1.36
UPF2Q9HAU5 AC023424.1-201ENST00000496058 459 ntBASIC6.57□□□□□ -1.36
UPF2Q9HAU5 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 FTH1P11-201ENST00000517577 551 ntBASIC6.57□□□□□ -1.36
UPF2Q9HAU5 AC020937.1-201ENST00000519677 1013 ntBASIC6.57□□□□□ -1.36
UPF2Q9HAU5 MRPS16P1-201ENST00000523462 412 ntBASIC6.57□□□□□ -1.36
UPF2Q9HAU5 OR8A2P-201ENST00000528631 952 ntBASIC6.57□□□□□ -1.36
UPF2Q9HAU5 AC022884.2-201ENST00000578535 580 ntBASIC6.57□□□□□ -1.36
UPF2Q9HAU5 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 RN7SL544P-201ENST00000617232 284 ntBASIC6.57□□□□□ -1.36
UPF2Q9HAU5 RN7SL763P-201ENST00000620922 284 ntBASIC6.57□□□□□ -1.36
UPF2Q9HAU5 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 AC111152.1-202ENST00000635848 339 ntBASIC6.57□□□□□ -1.36
UPF2Q9HAU5 AC087565.3-203ENST00000641018 837 ntBASIC6.57□□□□□ -1.36
UPF2Q9HAU5 OR8G3P-202ENST00000641572 1255 ntBASIC6.57□□□□□ -1.36
UPF2Q9HAU5 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
UPF2Q9HAU5 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 MRE11P1-201ENST00000464884 2127 ntBASIC6.56□□□□□ -1.36
UPF2Q9HAU5 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 MRRFP1-201ENST00000435941 1675 ntBASIC6.56□□□□□ -1.36
UPF2Q9HAU5 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 MTND6P2-201ENST00000512226 524 ntBASIC6.56□□□□□ -1.36
UPF2Q9HAU5 TMEM97P2-201ENST00000517841 403 ntBASIC6.56□□□□□ -1.36
UPF2Q9HAU5 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 CYCSP38-201ENST00000559840 322 ntBASIC6.56□□□□□ -1.36
UPF2Q9HAU5 AC023389.2-201ENST00000580031 955 ntBASIC6.56□□□□□ -1.36
UPF2Q9HAU5 RN7SL356P-201ENST00000582228 248 ntBASIC6.56□□□□□ -1.36
UPF2Q9HAU5 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 AC079791.1-201ENST00000605356 973 ntBASIC6.56□□□□□ -1.36
UPF2Q9HAU5 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 AP001052.1-201ENST00000626421 99 ntBASIC6.56□□□□□ -1.36
UPF2Q9HAU5 CASC19-274ENST00000642018 970 ntBASIC6.56□□□□□ -1.36
UPF2Q9HAU5 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
UPF2Q9HAU5 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms