Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 RNU1-56P-201ENST00000391303 164 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 MED28P1-201ENST00000399158 571 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 RN7SKP229-201ENST00000410465 302 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 RNA5SP80-201ENST00000410475 111 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 FCF1P2-201ENST00000415284 583 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 OFD1P12Y-201ENST00000427963 1207 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AL451074.3-201ENST00000437709 472 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AC083855.1-201ENST00000440041 258 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AC239367.2-201ENST00000447309 705 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AL035407.2-201ENST00000454090 378 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 RNU7-140P-201ENST00000459546 60 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AC115223.1-201ENST00000466377 870 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 MTND1P3-201ENST00000484956 952 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 TARS2P1-201ENST00000506124 2041 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 OR4C9P-201ENST00000532368 925 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AC025678.1-201ENST00000567861 338 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 RPS7P1-201ENST00000571702 585 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 NUTF2P8-201ENST00000604593 363 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AC122710.3-201ENST00000606566 541 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 ACACA-232ENST00000614438 569 ntTSL 2 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 MLECP1-201ENST00000615893 709 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 ZNF840P-201ENST00000504759 1996 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AL357556.1-201ENST00000421884 1388 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 DCN-220ENST00000552962 1930 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AP005901.5-201ENST00000545779 1796 ntBASIC7.31□□□□□ -1.24
CNTNAP3Q9BZ76 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 MTND5P33-201ENST00000571250 1450 ntBASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 HYDIN2-203ENST00000614586 13885 ntBASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 CALCOCO2-201ENST00000258947 3682 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 OR9M1P-202ENST00000641564 3163 ntBASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 MR1-205ENST00000434571 7479 ntTSL 5 BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 OR9K2-201ENST00000305377 1122 ntBASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 RNU1-122P-201ENST00000365538 156 ntBASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 SNORD42.2-201ENST00000365570 69 ntBASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 SNORA40.3-201ENST00000390964 122 ntBASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 AC093719.1-202ENST00000392735 373 ntBASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 RPS7-204ENST00000407445 833 ntTSL 2 BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 MIR548I3-201ENST00000408378 149 ntBASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 MIR548I1-201ENST00000408810 149 ntBASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 NRBF2P2-201ENST00000413087 861 ntBASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 RPL17P12-201ENST00000413391 526 ntBASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 Z93019.1-201ENST00000416450 973 ntBASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC7.3□□□□□ -1.24
CNTNAP3Q9BZ76 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms