Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 RPL23AP56-201ENST00000460778 453 ntBASIC5.08□□□□□ -1.6
VPS13AQ96RL7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 AC021106.3-201ENST00000623925 531 ntBASIC5.08□□□□□ -1.6
VPS13AQ96RL7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 THAP12P9-201ENST00000503971 2360 ntBASIC5.08□□□□□ -1.6
VPS13AQ96RL7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 RNA5SP191-201ENST00000362585 102 ntBASIC5.08□□□□□ -1.6
VPS13AQ96RL7 Z97832.1-201ENST00000402490 328 ntBASIC5.08□□□□□ -1.6
VPS13AQ96RL7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 OSTCP1-201ENST00000455507 450 ntBASIC5.08□□□□□ -1.6
VPS13AQ96RL7 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 RPL12P25-202ENST00000598100 674 ntBASIC5.08□□□□□ -1.6
VPS13AQ96RL7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 AC004232.3-201ENST00000622977 525 ntBASIC5.08□□□□□ -1.6
VPS13AQ96RL7 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 SEMA3E-201ENST00000307792 6476 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS13AQ96RL7 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 RAD17P2-201ENST00000451754 1977 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 MIR129-1-201ENST00000384972 72 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 KRT8P51-201ENST00000438938 274 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 AC023424.1-201ENST00000496058 459 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 RPSAP51-201ENST00000497462 645 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 RNU1-45P-201ENST00000517191 141 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 AP005131.7-201ENST00000610087 611 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 CASC19-255ENST00000641733 1385 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 OR7E25P-202ENST00000641088 5937 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 RNU1-13P-201ENST00000384499 162 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 OR6C69P-201ENST00000394268 893 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 AC007562.1-201ENST00000421819 517 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 VN1R21P-201ENST00000426703 765 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 RPS4XP16-201ENST00000427198 791 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 AC016027.5-201ENST00000427227 210 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 AC023274.2-201ENST00000445264 521 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 AP000797.2-201ENST00000475768 606 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.07□□□□□ -1.6
VPS13AQ96RL7 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS13AQ96RL7 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 AL592293.2-201ENST00000422292 996 ntBASIC5.06□□□□□ -1.6
VPS13AQ96RL7 OR4C10P-201ENST00000434991 931 ntBASIC5.06□□□□□ -1.6
VPS13AQ96RL7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 AC011276.1-201ENST00000469688 323 ntBASIC5.06□□□□□ -1.6
VPS13AQ96RL7 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 AC112200.1-201ENST00000625015 234 ntBASIC5.06□□□□□ -1.6
VPS13AQ96RL7 ERG-204ENST00000398907 4809 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS13AQ96RL7 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms