Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AC016716.1-201ENST00000265882 708 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 Y_RNA.11-201ENST00000362375 109 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 RN7SKP33-201ENST00000410942 340 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 DNAJA1P2-201ENST00000421360 1197 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 RPS27AP7-201ENST00000422792 455 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 FTH1P20-201ENST00000434913 548 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 TIMM8BP2-201ENST00000445940 251 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 RPSAP39-201ENST00000467439 883 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AC104090.1-201ENST00000506341 1171 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AC093870.1-201ENST00000506837 213 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AC021220.1-201ENST00000507445 630 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 RNA5SP318-201ENST00000516352 92 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AC124293.1-201ENST00000530034 493 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AP001317.1-201ENST00000531194 960 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AP004247.1-201ENST00000531556 1289 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AC107958.1-201ENST00000556576 290 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 OR1E3-201ENST00000575608 948 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AC126175.1-201ENST00000617041 758 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 MIR6806-201ENST00000622141 64 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 RACK1-235ENST00000626067 564 ntTSL 2 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AC073488.9-201ENST00000631601 754 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 AC099654.12-201ENST00000639868 649 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 MTCO1P18-201ENST00000455518 1419 ntBASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CCDC85AQ96PX6 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 AC015871.3-201ENST00000618835 2261 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 AC096992.2-201ENST00000609553 1684 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 AC110597.1-201ENST00000562669 3176 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 RNU1-65P-201ENST00000363919 148 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 RNU6-560P-201ENST00000364007 108 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 RNA5SP77-201ENST00000365394 120 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 RNU6-1042P-201ENST00000384204 107 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 RNU6-114P-201ENST00000384704 105 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 RPL10P10-201ENST00000403509 664 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 AL356968.2-201ENST00000412769 1257 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 RANP6-201ENST00000413691 644 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 Z99497.1-201ENST00000421282 135 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 AC239367.3-201ENST00000428996 814 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 MTND1P2-201ENST00000430604 821 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 MTND3P23-201ENST00000431980 347 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 MTND1P30-201ENST00000441241 901 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 GAPDHP33-201ENST00000443168 1013 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 DEFA11P-201ENST00000446470 261 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 WASF1P1-201ENST00000447560 1131 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 AL390198.2-201ENST00000510553 222 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 OR52H2P-201ENST00000514607 902 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 FABP5P5-201ENST00000515537 406 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 OR5AZ1P-201ENST00000527448 943 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 AC244034.2-201ENST00000562504 509 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 AC092325.1-201ENST00000566449 554 ntBASIC8.34□□□□□ -1.07
CCDC85AQ96PX6 ANKRD36BP2-206ENST00000575193 1245 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms