Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 ADAM24P-201ENST00000398655 2101 ntBASIC5.6□□□□□ -1.51
CSPG4P5Q96PW8 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CSPG4P5Q96PW8 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.6□□□□□ -1.51
CSPG4P5Q96PW8 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CSPG4P5Q96PW8 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CSPG4P5Q96PW8 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 RN7SKP124-201ENST00000364730 341 ntBASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 PRUNEP1-201ENST00000425846 705 ntBASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 GSTM5P1-201ENST00000434751 660 ntBASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 AC105399.1-202ENST00000447303 205 ntBASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 AC092754.1-201ENST00000472975 479 ntBASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 AC105420.1-201ENST00000504389 582 ntBASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 HMGB1P44-201ENST00000508597 572 ntBASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 UGT2A3P7-201ENST00000510485 734 ntBASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 HMGN1P9-201ENST00000515212 298 ntBASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 SNORA70.11-201ENST00000515987 138 ntBASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 SNORA70.13-201ENST00000516116 138 ntBASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 SCARNA16.4-201ENST00000516956 187 ntBASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 AP004607.2-201ENST00000533949 322 ntBASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 AC000068.2-201ENST00000608816 460 ntBASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 AL691477.1-201ENST00000624398 162 ntBASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CSPG4P5Q96PW8 AC109446.4-201ENST00000623235 2755 ntBASIC5.59□□□□□ -1.52
CSPG4P5Q96PW8 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CSPG4P5Q96PW8 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.59□□□□□ -1.52
CSPG4P5Q96PW8 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.59□□□□□ -1.52
CSPG4P5Q96PW8 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CSPG4P5Q96PW8 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 RNA5SP319-201ENST00000362768 119 ntBASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 TRAV35-201ENST00000390462 330 ntBASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 SNORA17A-201ENST00000391185 133 ntBASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 RN7SKP293-201ENST00000411389 296 ntBASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 RN7SL51P-201ENST00000468230 285 ntBASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 RPL35AP19-201ENST00000469425 329 ntBASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 EIF1P7-201ENST00000487533 337 ntBASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 RN7SL466P-201ENST00000497546 295 ntBASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 AC021193.1-201ENST00000511607 420 ntBASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 AC021733.2-201ENST00000518830 497 ntBASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 AC130364.2-201ENST00000528639 604 ntBASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 RN7SL356P-201ENST00000582228 248 ntBASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 AC010245.2-201ENST00000606908 1167 ntBASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 SNORA17.5-201ENST00000630429 132 ntBASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 AC099654.6-201ENST00000636487 512 ntBASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CSPG4P5Q96PW8 AC010266.2-201ENST00000564741 3255 ntBASIC5.57□□□□□ -1.52
CSPG4P5Q96PW8 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CSPG4P5Q96PW8 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CSPG4P5Q96PW8 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CSPG4P5Q96PW8 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CSPG4P5Q96PW8 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.57□□□□□ -1.52
CSPG4P5Q96PW8 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CSPG4P5Q96PW8 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.57□□□□□ -1.52
CSPG4P5Q96PW8 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CSPG4P5Q96PW8 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CSPG4P5Q96PW8 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CSPG4P5Q96PW8 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CSPG4P5Q96PW8 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CSPG4P5Q96PW8 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.57□□□□□ -1.52
CSPG4P5Q96PW8 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms