Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AP004372.1-201ENST00000604842 844 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AC110792.4-201ENST00000609843 298 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 MIR6809-201ENST00000612189 116 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AC245014.3-201ENST00000618589 347 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 AC022306.3-201ENST00000619930 550 ntBASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CHMP4CQ96CF2 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AL034546.1-201ENST00000623740 3693 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 RPL11P3-201ENST00000395256 523 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 DPPA2P2-201ENST00000418220 897 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 MARK2P12-201ENST00000420129 585 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 NAP1L4P2-201ENST00000425958 899 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 RPS3AP38-201ENST00000435889 763 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AL138787.1-202ENST00000437804 898 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AC016724.1-201ENST00000453215 421 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 SETP20-201ENST00000457046 852 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 MTND6P32-201ENST00000457611 483 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 SNORD46.2-201ENST00000516021 102 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AC060775.1-201ENST00000518241 520 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AP003396.4-201ENST00000527574 265 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AL121594.2-201ENST00000541658 472 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 RPA2P1-201ENST00000556557 721 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AC067838.1-201ENST00000606064 577 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AL445670.1-201ENST00000618889 801 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AC097460.3-201ENST00000623099 442 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AP000550.3-201ENST00000637734 379 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 WDR95P-201ENST00000425638 1542 ntBASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CHMP4CQ96CF2 MTND4P9-201ENST00000507819 1346 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 GNL2P1-201ENST00000451274 2190 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AL445466.1-201ENST00000448432 357 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 MTND2P6-201ENST00000455337 1030 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC108751.3-201ENST00000461814 1020 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC084754.1-201ENST00000463466 464 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC012123.2-201ENST00000485809 248 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 PSMA2P2-201ENST00000504319 686 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 TOMM22P4-201ENST00000511318 336 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 NOP56P3-201ENST00000549457 385 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 HNRNPCP1-201ENST00000556181 766 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 ABI1P1-201ENST00000603375 1120 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC004775.1-201ENST00000607389 753 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 MIR6862-1-201ENST00000613016 70 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 MIR6862-2-201ENST00000614755 70 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC245389.2-201ENST00000616023 576 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC016957.2-201ENST00000616998 848 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC242843.1-201ENST00000618702 573 ntBASIC7.04□□□□□ -1.28
CHMP4CQ96CF2 AC022919.1-201ENST00000624979 626 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms