Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 AP001836.1-201ENST00000604675 523 ntBASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 NDUFA8P1-201ENST00000605525 367 ntBASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 MIR7109-201ENST00000613748 65 ntBASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 ZNF812P-201ENST00000457674 1694 ntBASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 AL354685.2-201ENST00000448218 1447 ntBASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHKBP1Q8TBC3 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 RNA5SP321-201ENST00000362722 111 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 RPL9P21-201ENST00000392269 505 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 RNU2-66P-201ENST00000410650 161 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 OR6K4P-201ENST00000423179 955 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AC104651.1-201ENST00000427559 735 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 KCTD9P1-201ENST00000430462 1167 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 ATP5HP2-201ENST00000433885 485 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AC013410.1-201ENST00000436223 1232 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 COL11A2P1-205ENST00000441798 676 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AC023271.1-201ENST00000445936 1090 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AC233982.1-201ENST00000451247 436 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 PABPC1P1-201ENST00000506347 591 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 MTATP6P22-201ENST00000507369 598 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AC008837.1-201ENST00000511513 412 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AC093770.1-201ENST00000511559 571 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 NPM1P6-201ENST00000521088 871 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 NATP-201ENST00000523491 878 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AC104417.1-201ENST00000523974 751 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AC005000.1-201ENST00000536192 288 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AC010198.2-201ENST00000550612 259 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AC106734.1-201ENST00000568646 663 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AC091133.5-201ENST00000603088 301 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 MIR6806-201ENST00000622141 64 ntBASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SHKBP1Q8TBC3 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms