Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AL157702.1-201ENST00000398764 426 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AL049545.1-201ENST00000401856 572 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 MTND4P32-201ENST00000437189 1237 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AC015983.1-201ENST00000441577 373 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AC092691.2-201ENST00000461787 803 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AC079080.1-201ENST00000479841 822 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 GUSBP9-201ENST00000510138 584 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 RNA5SP206-201ENST00000516703 121 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 IGKV1D-22-201ENST00000518953 324 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 HAUS1P3-201ENST00000523909 662 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AC122134.1-201ENST00000565664 1104 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AC005332.4-201ENST00000592752 579 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AL589863.1-201ENST00000595383 631 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 GAS5-AS1-201ENST00000602767 694 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AC079315.1-201ENST00000602952 623 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AL358072.1-201ENST00000604156 575 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 WBP1LP12-201ENST00000604449 331 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 MIR6071-201ENST00000616741 78 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AC079416.3-201ENST00000624479 549 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 AP001052.1-201ENST00000626421 99 ntBASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIMC1Q8NDZ2 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 DDX43P2-201ENST00000604753 1354 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 HSPD1P14-201ENST00000432666 1618 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC007382.1-201ENST00000624376 2618 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 MT-TP-201ENST00000387461 68 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 LRRC37BP1-201ENST00000398851 714 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 RNA5SP115-201ENST00000411160 107 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 RPA2P2-201ENST00000419698 796 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 TCEA1P2-201ENST00000420496 906 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AL139158.1-201ENST00000424719 340 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC013262.1-201ENST00000426710 252 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 RPL5P2-201ENST00000429598 854 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 RPL6P30-201ENST00000443382 862 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 EXOSC3P1-201ENST00000448649 500 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 RN7SL221P-201ENST00000466190 281 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC020779.1-201ENST00000478757 796 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 NPM1P17-201ENST00000479221 602 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 Y_RNA.688-201ENST00000516565 95 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC011853.1-201ENST00000518911 454 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 COX6B1P4-201ENST00000519826 484 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC007834.2-201ENST00000536310 343 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 TDGP1-201ENST00000543961 1229 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC008055.1-201ENST00000547032 609 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AL442163.2-201ENST00000553912 710 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms