Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AC079148.1-201ENST00000565944 819 ntBASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AC092266.1-201ENST00000610958 165 ntBASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AL627171.1-201ENST00000618845 1308 ntBASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 AC090181.3-201ENST00000624777 1514 ntBASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.38□□□□□ -1.55
CLIP4Q8N3C7 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC083899.1-201ENST00000454465 3819 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 RNA5SP91-201ENST00000390902 119 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AL035405.1-201ENST00000400795 710 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AL392003.1-201ENST00000434394 243 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 TIMM8BP2-201ENST00000445940 251 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AL606517.1-201ENST00000446914 387 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 EEF1B2P3-201ENST00000447718 678 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 GEMIN2P1-201ENST00000454246 752 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC135999.1-201ENST00000478962 479 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 HSD3BP3-201ENST00000514706 994 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC091078.2-201ENST00000557145 559 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC093510.2-201ENST00000562820 896 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AL163952.1-202ENST00000569625 600 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC005244.1-201ENST00000582566 339 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AF129408.1-201ENST00000608767 431 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AL138955.1-201ENST00000622881 1040 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AP000770.2-201ENST00000623694 100 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC008993.2-201ENST00000631744 806 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AC006600.2-201ENST00000624834 2506 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 QRSL1P1-201ENST00000400977 1540 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 CDY11P-201ENST00000447168 1651 ntBASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CLIP4Q8N3C7 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLIP4Q8N3C7 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CLIP4Q8N3C7 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms