Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AC090643.1-201ENST00000623600 3100 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AL353625.1-202ENST00000366273 571 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 MIR187-201ENST00000385062 109 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 ARSFP1-201ENST00000398758 477 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 RNU2-62P-201ENST00000410868 191 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AC073900.1-201ENST00000429766 776 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 Z99127.2-201ENST00000441426 334 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 HMGN1P32-201ENST00000441744 256 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 GAPDHP17-201ENST00000449858 1001 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 GOT2P2-201ENST00000450663 1251 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 RPS15AP36-201ENST00000492022 382 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AC073358.1-201ENST00000505671 684 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 RNA5SP287-201ENST00000516358 103 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 IGLV1-62-201ENST00000518003 441 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AP002004.1-206ENST00000532441 876 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AC018630.1-201ENST00000541376 925 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 NANOGNBP2-201ENST00000544753 553 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 CR383656.6-201ENST00000550518 394 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 NRBF2P5-201ENST00000603087 788 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AC113194.1-201ENST00000606037 500 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 MIR6889-201ENST00000613185 59 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AL158801.5-201ENST00000623123 465 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AL034370.1-201ENST00000397254 1590 ntBASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC7.62□□□□□ -1.19
NPAS3Q8IXF0 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 LINC02035-201ENST00000610128 5476 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 Y_RNA.188-201ENST00000363952 111 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 RNU6-297P-201ENST00000384636 107 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 RNU6-932P-201ENST00000391108 106 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 PDCL3P5-201ENST00000398028 722 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AL122016.1-201ENST00000403365 367 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC7.61□□□□□ -1.19
NPAS3Q8IXF0 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 204.4 ms