Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AC008147.3-201ENST00000548666 354 ntBASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 RBM22P12-201ENST00000567098 1255 ntBASIC6.31□□□□□ -1.4
HERC6Q8IVU3 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 OR4H6P-202ENST00000603819 340 ntBASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AL109620.1-201ENST00000618738 1197 ntBASIC6.31□□□□□ -1.4
HERC6Q8IVU3 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 AL390318.1-201ENST00000624564 687 ntBASIC6.31□□□□□ -1.4
HERC6Q8IVU3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
HERC6Q8IVU3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 SAMMSON-210ENST00000641260 1308 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 DNM1P47-203ENST00000571780 12667 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 RN7SKP115-201ENST00000363177 317 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 OR6K3-202ENST00000368146 996 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 OR13C3-201ENST00000374781 1108 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 SNORA40.4-201ENST00000390971 128 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 AL360271.1-201ENST00000395679 510 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 RPS17P17-201ENST00000419392 409 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 RAB28P2-201ENST00000454299 641 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 AP002345.1-201ENST00000456493 928 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 LDHBP2-201ENST00000456969 1005 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 AC079841.1-201ENST00000481228 950 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 RPS4XP1-201ENST00000482189 787 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 AOX3P-204ENST00000491025 2107 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 AP001804.2-201ENST00000533932 910 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 OR4H6P-201ENST00000563771 921 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 GARSP1-201ENST00000570895 719 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 MTND2P13-201ENST00000577438 1039 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 Mico1.1-201ENST00000611698 204 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 AC015922.4-201ENST00000612568 690 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 uc_338.26-201ENST00000612659 160 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 AL356317.1-201ENST00000396110 1436 ntBASIC6.3□□□□□ -1.4
HERC6Q8IVU3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HERC6Q8IVU3 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 RNA5SP319-201ENST00000362768 119 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 RNA5SP234-201ENST00000363916 119 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 SNORD65-201ENST00000391079 73 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 UBE2V1P15-201ENST00000407776 448 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 RN7SKP273-201ENST00000411392 314 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 TMA16P2-201ENST00000413187 601 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 PTCD2P2-201ENST00000415579 1095 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 GLUD1P9-201ENST00000420997 1173 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.29□□□□□ -1.4
HERC6Q8IVU3 LDHAP2-201ENST00000437325 985 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 AL691517.1-201ENST00000440833 1235 ntBASIC6.29□□□□□ -1.4
HERC6Q8IVU3 DDX6P1-205ENST00000441966 1436 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms