Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHFQ7M4L6 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHFQ7M4L6 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 MRRFP1-201ENST00000435941 1675 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 AC003985.2-201ENST00000562268 1669 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 OR9K1P-202ENST00000641111 3217 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 NAMPTP1-201ENST00000440465 2514 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 CASC19-261ENST00000641853 1638 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 RN7SKP185-201ENST00000362813 326 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 RN7SKP69-201ENST00000365390 305 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 MIR188-201ENST00000385034 86 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 SNORD65-201ENST00000391079 73 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 AL158827.1-201ENST00000416300 391 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 RPL7AP51-201ENST00000422016 760 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 PTP4A1P3-201ENST00000433661 420 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 AL356121.1-201ENST00000442911 156 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 RPS7P3-201ENST00000443360 580 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 RPS23P9-201ENST00000448848 438 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 AC092865.4-201ENST00000477936 615 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 RPS26P24-201ENST00000497656 331 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 AC008629.2-201ENST00000503783 483 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 HMGN1P16-201ENST00000508308 283 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 RFPL4AP3-201ENST00000515267 345 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 AC138832.1-201ENST00000522871 556 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 MT1CP-201ENST00000567054 174 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 AC096947.1-201ENST00000603233 470 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 AC006363.1-201ENST00000603806 463 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 AP004372.1-201ENST00000604842 844 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 AC022001.1-201ENST00000605193 268 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 AC092681.3-201ENST00000609463 678 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 AL080312.2-201ENST00000613001 630 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 MIR8084-201ENST00000614105 89 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 MIR6774-201ENST00000614651 70 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 AC012676.3-201ENST00000614983 479 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 AC015712.7-201ENST00000615211 635 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 AL357562.1-201ENST00000624911 609 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 AC007603.3-201ENST00000636915 979 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 ICE2P1-201ENST00000512800 1849 ntBASIC5.24□□□□□ -1.57
SHFQ7M4L6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SHFQ7M4L6 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.24□□□□□ -1.57
SHFQ7M4L6 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHFQ7M4L6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHFQ7M4L6 HSPA8P14-201ENST00000552265 1805 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHFQ7M4L6 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SHFQ7M4L6 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SHFQ7M4L6 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 NPM1P38-201ENST00000403835 865 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC064862.5-201ENST00000440618 334 ntBASIC5.23□□□□□ -1.57
SHFQ7M4L6 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms