Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RNU1-136P-201ENST00000384181 164 ntBASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 RNU1-149P-201ENST00000390870 161 ntBASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 FAM96AP1-201ENST00000430879 482 ntBASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 REG1CP-206ENST00000447469 496 ntBASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 CR383656.1-201ENST00000484916 377 ntBASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 OR1F2P-201ENST00000570470 933 ntBASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 MIR4436B2-201ENST00000581415 91 ntBASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 MIR4436B1-201ENST00000583272 91 ntBASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 AC069307.1-201ENST00000602820 447 ntBASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 AC087763.1-201ENST00000603391 286 ntBASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 AL139041.1-201ENST00000605480 610 ntBASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
SHROOM1Q2M3G4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SHROOM1Q2M3G4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SHROOM1Q2M3G4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
SHROOM1Q2M3G4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SHROOM1Q2M3G4 AC068870.3-201ENST00000625077 2536 ntBASIC6.4□□□□□ -1.39
SHROOM1Q2M3G4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
SHROOM1Q2M3G4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.39
SHROOM1Q2M3G4 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SHROOM1Q2M3G4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
SHROOM1Q2M3G4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SHROOM1Q2M3G4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.4□□□□□ -1.39
SHROOM1Q2M3G4 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 AC232271.1-201ENST00000602455 2715 ntBASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 PROS2P-201ENST00000474651 1951 ntBASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 AC103591.2-201ENST00000265259 766 ntBASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 RPL7P6-201ENST00000480903 738 ntBASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 COX6B1P2-201ENST00000489624 230 ntBASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 AC231760.1-201ENST00000498002 260 ntBASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 AC093815.1-201ENST00000508637 280 ntBASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 HMGB1P40-201ENST00000525121 540 ntBASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 EIF4A2P5-201ENST00000529914 499 ntBASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHROOM1Q2M3G4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 AL109941.1-201ENST00000401925 229 ntBASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 RN7SKP213-201ENST00000410746 298 ntBASIC6.38□□□□□ -1.39
SHROOM1Q2M3G4 RN7SKP279-201ENST00000411383 298 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms