Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 Z97832.1-201ENST00000402490 328 ntBASIC3.19□□□□□ -1.9
HSPG2P98160 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.19□□□□□ -1.9
HSPG2P98160 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.19□□□□□ -1.9
HSPG2P98160 KRT8P51-201ENST00000438938 274 ntBASIC3.19□□□□□ -1.9
HSPG2P98160 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HSPG2P98160 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.19□□□□□ -1.9
HSPG2P98160 AL451063.1-201ENST00000450164 1133 ntBASIC3.19□□□□□ -1.9
HSPG2P98160 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HSPG2P98160 AC024451.1-201ENST00000508013 779 ntBASIC3.19□□□□□ -1.9
HSPG2P98160 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.19□□□□□ -1.9
HSPG2P98160 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.19□□□□□ -1.9
HSPG2P98160 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HSPG2P98160 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
HSPG2P98160 AC006511.3-201ENST00000624929 1783 ntBASIC3.19□□□□□ -1.9
HSPG2P98160 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC3.19□□□□□ -1.9
HSPG2P98160 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HSPG2P98160 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HSPG2P98160 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HSPG2P98160 HSPD1P8-201ENST00000400121 1658 ntBASIC3.19□□□□□ -1.9
HSPG2P98160 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HSPG2P98160 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
HSPG2P98160 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HSPG2P98160 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HSPG2P98160 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HSPG2P98160 RNU1-13P-201ENST00000384499 162 ntBASIC3.19□□□□□ -1.9
HSPG2P98160 MIR105-1-201ENST00000385222 81 ntBASIC3.19□□□□□ -1.9
HSPG2P98160 AL607077.1-201ENST00000401718 499 ntBASIC3.19□□□□□ -1.9
HSPG2P98160 SCARNA16.4-201ENST00000516956 187 ntBASIC3.19□□□□□ -1.9
HSPG2P98160 AC020910.3-201ENST00000603701 874 ntBASIC3.19□□□□□ -1.9
HSPG2P98160 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC3.18□□□□□ -1.9
HSPG2P98160 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC3.18□□□□□ -1.9
HSPG2P98160 AL592148.3-201ENST00000608771 2646 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
HSPG2P98160 AL353626.3-201ENST00000413399 657 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 AC007562.1-201ENST00000421819 517 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 AC006065.1-201ENST00000422539 802 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC3.18□□□□□ -1.9
HSPG2P98160 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC3.18□□□□□ -1.9
HSPG2P98160 AC023274.2-201ENST00000445264 521 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 IGBP1P3-201ENST00000447449 1000 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 OR11H3P-201ENST00000554547 982 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.18□□□□□ -1.9
HSPG2P98160 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC3.18□□□□□ -1.9
HSPG2P98160 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC3.18□□□□□ -1.9
HSPG2P98160 AL121890.3-201ENST00000618494 516 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 AC135068.5-201ENST00000624197 983 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC3.18□□□□□ -1.9
HSPG2P98160 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 AC144833.1-201ENST00000567953 4089 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.18□□□□□ -1.9
HSPG2P98160 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC3.18□□□□□ -1.9
HSPG2P98160 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 RN7SKP106-201ENST00000410832 272 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 RAB9AP4-201ENST00000415230 609 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC3.18□□□□□ -1.9
HSPG2P98160 AC073143.1-201ENST00000436316 395 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
HSPG2P98160 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.18□□□□□ -1.9
HSPG2P98160 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC3.18□□□□□ -1.9
HSPG2P98160 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.18□□□□□ -1.9
HSPG2P98160 AC006115.2-201ENST00000596823 202 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 AC090948.1-201ENST00000607464 549 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 AC099676.1-201ENST00000608886 657 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HSPG2P98160 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.18□□□□□ -1.9
HSPG2P98160 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC3.18□□□□□ -1.9
HSPG2P98160 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HSPG2P98160 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC3.18□□□□□ -1.9
HSPG2P98160 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 MYO5A-213ENST00000613858 12139 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
HSPG2P98160 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
HSPG2P98160 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 BX510359.2-201ENST00000417920 305 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 AC091390.3-201ENST00000426478 338 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.18□□□□□ -1.9
HSPG2P98160 AC073465.2-201ENST00000440938 498 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 SCARNA10-201ENST00000459255 330 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.18□□□□□ -1.9
HSPG2P98160 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 AL163952.1-202ENST00000569625 600 ntBASIC3.18□□□□□ -1.9
HSPG2P98160 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.18□□□□□ -1.9
HSPG2P98160 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
HSPG2P98160 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.18□□□□□ -1.9
HSPG2P98160 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC3.18□□□□□ -1.9
HSPG2P98160 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
HSPG2P98160 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC3.18□□□□□ -1.9
HSPG2P98160 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC3.18□□□□□ -1.9
HSPG2P98160 AC022164.1-201ENST00000568767 2673 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms