Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RN7SL174P-201ENST00000475578 289 ntBASIC5.17□□□□□ -1.58
LIM2P55344 RN7SL101P-201ENST00000496350 279 ntBASIC5.17□□□□□ -1.58
LIM2P55344 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.17□□□□□ -1.58
LIM2P55344 AC091912.1-201ENST00000511351 248 ntBASIC5.17□□□□□ -1.58
LIM2P55344 MTND6P2-201ENST00000512226 524 ntBASIC5.17□□□□□ -1.58
LIM2P55344 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.17□□□□□ -1.58
LIM2P55344 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.17□□□□□ -1.58
LIM2P55344 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.17□□□□□ -1.58
LIM2P55344 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.17□□□□□ -1.58
LIM2P55344 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.17□□□□□ -1.58
LIM2P55344 AC073869.8-201ENST00000641806 335 ntBASIC5.17□□□□□ -1.58
LIM2P55344 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LIM2P55344 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
LIM2P55344 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.17□□□□□ -1.58
LIM2P55344 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.17□□□□□ -1.58
LIM2P55344 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LIM2P55344 CASC19-248ENST00000641674 1356 ntBASIC5.16□□□□□ -1.58
LIM2P55344 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIM2P55344 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
LIM2P55344 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LIM2P55344 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.16□□□□□ -1.58
LIM2P55344 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIM2P55344 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
LIM2P55344 AC090220.1-201ENST00000593078 1699 ntBASIC5.16□□□□□ -1.58
LIM2P55344 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.16□□□□□ -1.58
LIM2P55344 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LIM2P55344 SNORA16A-201ENST00000384342 137 ntBASIC5.16□□□□□ -1.58
LIM2P55344 AC079809.1-201ENST00000415468 276 ntBASIC5.16□□□□□ -1.58
LIM2P55344 CHEK2P5-201ENST00000423877 246 ntBASIC5.16□□□□□ -1.58
LIM2P55344 RPL5P25-201ENST00000441148 775 ntBASIC5.16□□□□□ -1.58
LIM2P55344 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.16□□□□□ -1.58
LIM2P55344 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.16□□□□□ -1.58
LIM2P55344 TAAR4P-201ENST00000454843 1039 ntBASIC5.16□□□□□ -1.58
LIM2P55344 AC100832.1-201ENST00000471945 383 ntBASIC5.16□□□□□ -1.58
LIM2P55344 EIF1P7-201ENST00000487533 337 ntBASIC5.16□□□□□ -1.58
LIM2P55344 AL136038.1-201ENST00000497246 351 ntBASIC5.16□□□□□ -1.58
LIM2P55344 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.16□□□□□ -1.58
LIM2P55344 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.16□□□□□ -1.58
LIM2P55344 GTF2IP11-201ENST00000526931 420 ntBASIC5.16□□□□□ -1.58
LIM2P55344 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.16□□□□□ -1.58
LIM2P55344 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIM2P55344 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LIM2P55344 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LIM2P55344 AC027216.1-201ENST00000577726 685 ntBASIC5.16□□□□□ -1.58
LIM2P55344 AC011445.2-201ENST00000599274 173 ntBASIC5.16□□□□□ -1.58
LIM2P55344 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.16□□□□□ -1.58
LIM2P55344 AC000068.2-201ENST00000608816 460 ntBASIC5.16□□□□□ -1.58
LIM2P55344 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.16□□□□□ -1.58
LIM2P55344 MIR8080-201ENST00000622224 89 ntBASIC5.16□□□□□ -1.58
LIM2P55344 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.16□□□□□ -1.58
LIM2P55344 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LIM2P55344 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LIM2P55344 AL078595.2-201ENST00000605309 1780 ntBASIC5.16□□□□□ -1.58
LIM2P55344 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.16□□□□□ -1.58
LIM2P55344 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LIM2P55344 AC083837.1-201ENST00000565297 2994 ntBASIC5.16□□□□□ -1.58
LIM2P55344 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.15□□□□□ -1.58
LIM2P55344 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
LIM2P55344 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
LIM2P55344 AC027279.1-201ENST00000568885 4284 ntBASIC5.15□□□□□ -1.58
LIM2P55344 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.15□□□□□ -1.58
LIM2P55344 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.15□□□□□ -1.58
LIM2P55344 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.15□□□□□ -1.58
LIM2P55344 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
LIM2P55344 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.15□□□□□ -1.59
LIM2P55344 MIR143-201ENST00000385300 106 ntBASIC5.15□□□□□ -1.59
LIM2P55344 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.15□□□□□ -1.59
LIM2P55344 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.15□□□□□ -1.59
LIM2P55344 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.15□□□□□ -1.59
LIM2P55344 AC105399.1-202ENST00000447303 205 ntBASIC5.15□□□□□ -1.59
LIM2P55344 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.15□□□□□ -1.59
LIM2P55344 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.15□□□□□ -1.59
LIM2P55344 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.15□□□□□ -1.59
LIM2P55344 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.15□□□□□ -1.59
LIM2P55344 AC112184.1-201ENST00000505179 312 ntBASIC5.15□□□□□ -1.59
LIM2P55344 AC109464.1-201ENST00000511091 819 ntBASIC5.15□□□□□ -1.59
LIM2P55344 RNA5SP362-201ENST00000516048 118 ntBASIC5.15□□□□□ -1.59
LIM2P55344 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.15□□□□□ -1.59
LIM2P55344 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.15□□□□□ -1.59
LIM2P55344 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.59
LIM2P55344 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LIM2P55344 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.15□□□□□ -1.59
LIM2P55344 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.15□□□□□ -1.59
LIM2P55344 AP000769.2-201ENST00000602344 396 ntBASIC5.15□□□□□ -1.59
LIM2P55344 FAM72A-208ENST00000607379 1139 ntBASIC5.15□□□□□ -1.59
LIM2P55344 uc_338.7-201ENST00000621834 124 ntBASIC5.15□□□□□ -1.59
LIM2P55344 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.59
LIM2P55344 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LIM2P55344 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
LIM2P55344 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LIM2P55344 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
LIM2P55344 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LIM2P55344 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms