Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
LIMK1P53667 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LIMK1P53667 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIMK1P53667 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LIMK1P53667 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.8□□□□□ -1.48
LIMK1P53667 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIMK1P53667 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.8□□□□□ -1.48
LIMK1P53667 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LIMK1P53667 AOX3P-204ENST00000491025 2107 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIMK1P53667 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.8□□□□□ -1.48
LIMK1P53667 AC119674.1-202ENST00000641333 1860 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LIMK1P53667 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.8□□□□□ -1.48
LIMK1P53667 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIMK1P53667 SNORA56-201ENST00000383966 129 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 RN7SKP273-201ENST00000411392 314 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.8□□□□□ -1.48
LIMK1P53667 AL590762.4-201ENST00000425885 253 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 VDAC1P6-201ENST00000430062 855 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 HMGB3P24-201ENST00000433260 622 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 AL390879.1-201ENST00000439143 386 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 AL390119.1-201ENST00000440329 312 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 CEACAMP7-201ENST00000444105 496 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 RPS27AP3-201ENST00000453803 454 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.8□□□□□ -1.48
LIMK1P53667 MTND6P32-201ENST00000457611 483 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 RPL35AP19-201ENST00000469425 329 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.8□□□□□ -1.48
LIMK1P53667 OR51K1P-201ENST00000510214 950 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 RPS27AP18-201ENST00000515536 459 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.8□□□□□ -1.48
LIMK1P53667 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.8□□□□□ -1.48
LIMK1P53667 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.8□□□□□ -1.48
LIMK1P53667 AP000676.2-201ENST00000529711 301 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 AC078878.1-201ENST00000539832 958 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 DPPA2P4-201ENST00000563717 878 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.8□□□□□ -1.48
LIMK1P53667 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.8□□□□□ -1.48
LIMK1P53667 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.8□□□□□ -1.48
LIMK1P53667 AC005840.5-201ENST00000619166 599 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.8□□□□□ -1.48
LIMK1P53667 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LIMK1P53667 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
LIMK1P53667 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIMK1P53667 YES1P1-201ENST00000418510 1628 ntBASIC5.8□□□□□ -1.48
LIMK1P53667 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.8□□□□□ -1.48
LIMK1P53667 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIMK1P53667 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.8□□□□□ -1.48
LIMK1P53667 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIMK1P53667 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LIMK1P53667 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIMK1P53667 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIMK1P53667 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LIMK1P53667 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.79□□□□□ -1.48
LIMK1P53667 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIMK1P53667 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LIMK1P53667 AC131971.1-201ENST00000332881 1482 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.79□□□□□ -1.48
LIMK1P53667 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIMK1P53667 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIMK1P53667 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LIMK1P53667 RNA5SP183-201ENST00000362452 119 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
LIMK1P53667 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LIMK1P53667 AC005042.1-201ENST00000393397 800 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 HMGB3P7-201ENST00000400214 611 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 SNRPEP6-201ENST00000407465 277 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 RAB9AP4-201ENST00000415230 609 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 AC244453.4-201ENST00000419150 388 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.79□□□□□ -1.48
LIMK1P53667 XKRYP6-201ENST00000440468 1116 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 XKRYP3-201ENST00000442113 1116 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.79□□□□□ -1.48
LIMK1P53667 AC002553.2-201ENST00000453217 340 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 HIGD1AP8-201ENST00000453927 274 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 C1DP3-201ENST00000455013 423 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 RPL35AP28-201ENST00000459730 331 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 RPL7AP10-201ENST00000481016 791 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 RPSAP50-201ENST00000481955 852 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 AC099521.1-201ENST00000482557 334 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 RN7SL97P-201ENST00000486780 299 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 AC090058.1-201ENST00000498788 435 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.79□□□□□ -1.48
LIMK1P53667 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.79□□□□□ -1.48
LIMK1P53667 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.79□□□□□ -1.48
LIMK1P53667 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.79□□□□□ -1.48
LIMK1P53667 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.79□□□□□ -1.48
LIMK1P53667 OR4A42P-201ENST00000531397 938 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LIMK1P53667 AL049779.2-201ENST00000553847 315 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.79□□□□□ -1.48
LIMK1P53667 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.79□□□□□ -1.48
LIMK1P53667 AC010245.2-201ENST00000606908 1167 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.79□□□□□ -1.48
LIMK1P53667 AC090510.2-201ENST00000617465 629 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 MIR6810-201ENST00000622701 70 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms