Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUP98P52948 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
NUP98P52948 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUP98P52948 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
NUP98P52948 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUP98P52948 AC012213.2-201ENST00000562917 4597 ntBASIC6.56□□□□□ -1.36
NUP98P52948 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NUP98P52948 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NUP98P52948 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUP98P52948 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUP98P52948 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NUP98P52948 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUP98P52948 AC107980.1-201ENST00000558671 3355 ntBASIC6.55□□□□□ -1.36
NUP98P52948 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUP98P52948 RPL12P17-201ENST00000432393 498 ntBASIC6.55□□□□□ -1.36
NUP98P52948 NDUFA5P8-201ENST00000449019 346 ntBASIC6.55□□□□□ -1.36
NUP98P52948 RPL7P41-201ENST00000485823 957 ntBASIC6.55□□□□□ -1.36
NUP98P52948 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.55□□□□□ -1.36
NUP98P52948 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.55□□□□□ -1.36
NUP98P52948 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.55□□□□□ -1.36
NUP98P52948 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.55□□□□□ -1.36
NUP98P52948 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.55□□□□□ -1.36
NUP98P52948 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUP98P52948 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.55□□□□□ -1.36
NUP98P52948 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
NUP98P52948 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUP98P52948 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NUP98P52948 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NUP98P52948 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NUP98P52948 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.55□□□□□ -1.36
NUP98P52948 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUP98P52948 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NUP98P52948 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.55□□□□□ -1.36
NUP98P52948 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUP98P52948 AC015799.1-201ENST00000622996 3122 ntBASIC6.55□□□□□ -1.36
NUP98P52948 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
NUP98P52948 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NUP98P52948 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NUP98P52948 SNORA51.8-201ENST00000384234 132 ntBASIC6.55□□□□□ -1.36
NUP98P52948 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NUP98P52948 CYB5AP4-201ENST00000396692 399 ntBASIC6.55□□□□□ -1.36
NUP98P52948 AC013442.1-201ENST00000397347 228 ntBASIC6.55□□□□□ -1.36
NUP98P52948 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.55□□□□□ -1.36
NUP98P52948 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.55□□□□□ -1.36
NUP98P52948 AC124944.2-201ENST00000429866 1242 ntBASIC6.55□□□□□ -1.36
NUP98P52948 AC007686.1-201ENST00000488511 463 ntBASIC6.55□□□□□ -1.36
NUP98P52948 GLUD1P3-202ENST00000508551 200 ntBASIC6.55□□□□□ -1.36
NUP98P52948 OR7H2P-201ENST00000513483 306 ntBASIC6.55□□□□□ -1.36
NUP98P52948 AC063949.1-201ENST00000552900 865 ntBASIC6.55□□□□□ -1.36
NUP98P52948 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.55□□□□□ -1.36
NUP98P52948 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.55□□□□□ -1.36
NUP98P52948 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.55□□□□□ -1.36
NUP98P52948 AC008814.1-201ENST00000603797 406 ntBASIC6.55□□□□□ -1.36
NUP98P52948 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.55□□□□□ -1.36
NUP98P52948 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.55□□□□□ -1.36
NUP98P52948 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUP98P52948 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NUP98P52948 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.54□□□□□ -1.36
NUP98P52948 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
NUP98P52948 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.54□□□□□ -1.36
NUP98P52948 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NUP98P52948 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.54□□□□□ -1.36
NUP98P52948 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NUP98P52948 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NUP98P52948 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.54□□□□□ -1.36
NUP98P52948 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
NUP98P52948 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NUP98P52948 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NUP98P52948 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.54□□□□□ -1.36
NUP98P52948 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.54□□□□□ -1.36
NUP98P52948 AL354714.3-201ENST00000447284 493 ntBASIC6.54□□□□□ -1.36
NUP98P52948 RN7SL738P-201ENST00000470264 297 ntBASIC6.54□□□□□ -1.36
NUP98P52948 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.54□□□□□ -1.36
NUP98P52948 OR4A6P-201ENST00000534364 970 ntBASIC6.54□□□□□ -1.36
NUP98P52948 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.54□□□□□ -1.36
NUP98P52948 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.54□□□□□ -1.36
NUP98P52948 AL031320.1-201ENST00000604177 357 ntBASIC6.54□□□□□ -1.36
NUP98P52948 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.54□□□□□ -1.36
NUP98P52948 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NUP98P52948 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
NUP98P52948 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.54□□□□□ -1.36
NUP98P52948 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
NUP98P52948 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NUP98P52948 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NUP98P52948 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NUP98P52948 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NUP98P52948 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
NUP98P52948 EPS15P1-202ENST00000459691 2071 ntBASIC6.53□□□□□ -1.36
NUP98P52948 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NUP98P52948 RN7SKP185-201ENST00000362813 326 ntBASIC6.53□□□□□ -1.36
NUP98P52948 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.53□□□□□ -1.36
NUP98P52948 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
NUP98P52948 MIR600-201ENST00000385007 98 ntBASIC6.53□□□□□ -1.36
NUP98P52948 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
NUP98P52948 AL078599.1-201ENST00000402075 293 ntBASIC6.53□□□□□ -1.36
NUP98P52948 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.53□□□□□ -1.36
NUP98P52948 CBX1P2-201ENST00000453841 458 ntBASIC6.53□□□□□ -1.36
NUP98P52948 AC140172.1-201ENST00000502928 141 ntBASIC6.53□□□□□ -1.36
NUP98P52948 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.53□□□□□ -1.36
NUP98P52948 RNA5SP43-201ENST00000516559 110 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms