Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC107982.1-201ENST00000507171 1300 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 AC021242.1-201ENST00000507315 2035 ntBASIC7.2□□□□□ -1.26
RNF144AP50876 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.2□□□□□ -1.26
RNF144AP50876 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.2□□□□□ -1.26
RNF144AP50876 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
RNF144AP50876 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC7.19□□□□□ -1.26
RNF144AP50876 AC008498.2-201ENST00000624033 2322 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
RNF144AP50876 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
RNF144AP50876 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RNF144AP50876 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.19□□□□□ -1.26
RNF144AP50876 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF144AP50876 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF144AP50876 Z83820.1-201ENST00000456978 1499 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RNF144AP50876 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RNF144AP50876 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RNF144AP50876 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF144AP50876 THAP12P7-201ENST00000520248 2290 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
RNF144AP50876 MIR559-201ENST00000385188 96 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC7.19□□□□□ -1.26
RNF144AP50876 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.19□□□□□ -1.26
RNF144AP50876 RNU6-195P-201ENST00000411352 109 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 RPS7P15-201ENST00000415804 584 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.19□□□□□ -1.26
RNF144AP50876 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC7.19□□□□□ -1.26
RNF144AP50876 RANP5-201ENST00000427731 655 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 ISCA1P6-201ENST00000427740 390 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 AC007559.1-201ENST00000428736 355 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 AC005033.1-201ENST00000428904 813 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.19□□□□□ -1.26
RNF144AP50876 BMS1P19-201ENST00000433925 393 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 FTH1P16-201ENST00000435241 552 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC7.19□□□□□ -1.26
RNF144AP50876 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
RNF144AP50876 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.19□□□□□ -1.26
RNF144AP50876 RPL23AP20-201ENST00000447965 421 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC7.19□□□□□ -1.26
RNF144AP50876 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF144AP50876 AL606490.1-201ENST00000452266 765 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 DBIL5P-202ENST00000453414 250 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 HSPE1P22-201ENST00000456856 327 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 RPS12P20-201ENST00000464109 380 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF144AP50876 RN7SL862P-201ENST00000491550 298 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 RN7SL569P-201ENST00000494652 288 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC7.19□□□□□ -1.26
RNF144AP50876 AL449212.1-201ENST00000499853 517 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.19□□□□□ -1.26
RNF144AP50876 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC7.19□□□□□ -1.26
RNF144AP50876 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.19□□□□□ -1.26
RNF144AP50876 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC7.19□□□□□ -1.26
RNF144AP50876 CASP1-216ENST00000534497 825 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF144AP50876 AC006206.2-201ENST00000537192 992 ntTSL 4 BASIC7.19□□□□□ -1.26
RNF144AP50876 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC7.19□□□□□ -1.26
RNF144AP50876 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.19□□□□□ -1.26
RNF144AP50876 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF144AP50876 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
RNF144AP50876 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF144AP50876 OR7A18P-201ENST00000600416 277 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 SNX29P2-204ENST00000603801 875 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 GSTTP1-204ENST00000621179 920 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
RNF144AP50876 PISRT1-201ENST00000626175 531 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 U6.107-201ENST00000637108 79 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
RNF144AP50876 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
RNF144AP50876 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF144AP50876 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC7.19□□□□□ -1.26
RNF144AP50876 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.19□□□□□ -1.26
RNF144AP50876 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF144AP50876 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF144AP50876 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RNF144AP50876 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF144AP50876 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
RNF144AP50876 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
RNF144AP50876 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.19□□□□□ -1.26
RNF144AP50876 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.19□□□□□ -1.26
RNF144AP50876 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF144AP50876 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RNF144AP50876 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
RNF144AP50876 MAPK10-313ENST00000641405 2469 ntBASIC7.19□□□□□ -1.26
RNF144AP50876 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RNF144AP50876 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RNF144AP50876 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
RNF144AP50876 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
RNF144AP50876 AL031651.1-201ENST00000615357 1438 ntBASIC7.18□□□□□ -1.26
RNF144AP50876 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
RNF144AP50876 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.18□□□□□ -1.26
RNF144AP50876 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
RNF144AP50876 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RNF144AP50876 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms