Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
KRT4P19013 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
KRT4P19013 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.05□□□□□ -1.44
KRT4P19013 AC109446.2-201ENST00000567872 497 ntBASIC6.05□□□□□ -1.44
KRT4P19013 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.05□□□□□ -1.44
KRT4P19013 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.05□□□□□ -1.44
KRT4P19013 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.05□□□□□ -1.44
KRT4P19013 NBR2-204ENST00000587322 63 ntBASIC6.05□□□□□ -1.44
KRT4P19013 AC060780.2-201ENST00000589047 198 ntBASIC6.05□□□□□ -1.44
KRT4P19013 AC010503.3-201ENST00000594355 540 ntBASIC6.05□□□□□ -1.44
KRT4P19013 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.05□□□□□ -1.44
KRT4P19013 AL606834.3-201ENST00000602615 496 ntBASIC6.05□□□□□ -1.44
KRT4P19013 Z99497.2-201ENST00000603634 310 ntBASIC6.05□□□□□ -1.44
KRT4P19013 AL158042.1-201ENST00000605338 460 ntBASIC6.05□□□□□ -1.44
KRT4P19013 AC112503.1-201ENST00000608436 391 ntBASIC6.05□□□□□ -1.44
KRT4P19013 AC090246.1-201ENST00000616499 426 ntBASIC6.05□□□□□ -1.44
KRT4P19013 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
KRT4P19013 AC095038.2-201ENST00000621464 1070 ntBASIC6.05□□□□□ -1.44
KRT4P19013 SNX18P12-201ENST00000624821 759 ntBASIC6.05□□□□□ -1.44
KRT4P19013 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.05□□□□□ -1.44
KRT4P19013 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.05□□□□□ -1.44
KRT4P19013 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.05□□□□□ -1.44
KRT4P19013 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
KRT4P19013 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.05□□□□□ -1.44
KRT4P19013 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
KRT4P19013 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.05□□□□□ -1.44
KRT4P19013 AC239868.2-201ENST00000564237 4527 ntBASIC6.05□□□□□ -1.44
KRT4P19013 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
KRT4P19013 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.05□□□□□ -1.44
KRT4P19013 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
KRT4P19013 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
KRT4P19013 AC025263.3-201ENST00000622965 1396 ntBASIC6.05□□□□□ -1.44
KRT4P19013 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
KRT4P19013 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
KRT4P19013 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
KRT4P19013 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
KRT4P19013 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.04□□□□□ -1.44
KRT4P19013 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
KRT4P19013 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
KRT4P19013 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
KRT4P19013 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
KRT4P19013 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
KRT4P19013 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
KRT4P19013 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
KRT4P19013 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
KRT4P19013 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.04□□□□□ -1.44
KRT4P19013 AL355488.2-201ENST00000609909 2850 ntBASIC6.04□□□□□ -1.44
KRT4P19013 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
KRT4P19013 RNA5SP346-201ENST00000363541 121 ntBASIC6.04□□□□□ -1.44
KRT4P19013 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
KRT4P19013 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.04□□□□□ -1.44
KRT4P19013 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.04□□□□□ -1.44
KRT4P19013 Y_RNA.436-201ENST00000384097 102 ntBASIC6.04□□□□□ -1.44
KRT4P19013 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.04□□□□□ -1.44
KRT4P19013 AL139100.1-201ENST00000408001 498 ntBASIC6.04□□□□□ -1.44
KRT4P19013 RNA5SP155-201ENST00000411154 129 ntBASIC6.04□□□□□ -1.44
KRT4P19013 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC6.04□□□□□ -1.44
KRT4P19013 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC6.04□□□□□ -1.44
KRT4P19013 RPL22P18-201ENST00000417197 377 ntBASIC6.04□□□□□ -1.44
KRT4P19013 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC6.04□□□□□ -1.44
KRT4P19013 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.04□□□□□ -1.44
KRT4P19013 AL138479.1-201ENST00000426913 484 ntBASIC6.04□□□□□ -1.44
KRT4P19013 AC010153.1-201ENST00000432862 727 ntBASIC6.04□□□□□ -1.44
KRT4P19013 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC6.04□□□□□ -1.44
KRT4P19013 CLNS1AP1-201ENST00000435954 682 ntBASIC6.04□□□□□ -1.44
KRT4P19013 AC006994.1-201ENST00000438212 839 ntBASIC6.04□□□□□ -1.44
KRT4P19013 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.04□□□□□ -1.44
KRT4P19013 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.04□□□□□ -1.44
KRT4P19013 MTND4P25-201ENST00000441039 533 ntBASIC6.04□□□□□ -1.44
KRT4P19013 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC6.04□□□□□ -1.44
KRT4P19013 AL133351.3-201ENST00000454998 193 ntBASIC6.04□□□□□ -1.44
KRT4P19013 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.04□□□□□ -1.44
KRT4P19013 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
KRT4P19013 DEFB109A-201ENST00000482450 265 ntBASIC6.04□□□□□ -1.44
KRT4P19013 RN7SL655P-201ENST00000486087 298 ntBASIC6.04□□□□□ -1.44
KRT4P19013 GM2AP2-201ENST00000491764 562 ntBASIC6.04□□□□□ -1.44
KRT4P19013 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC6.04□□□□□ -1.44
KRT4P19013 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC6.04□□□□□ -1.44
KRT4P19013 RFPL4AP3-201ENST00000515267 345 ntBASIC6.04□□□□□ -1.44
KRT4P19013 MINOS1P4-201ENST00000515470 318 ntBASIC6.04□□□□□ -1.44
KRT4P19013 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
KRT4P19013 AC027369.2-201ENST00000528030 440 ntBASIC6.04□□□□□ -1.44
KRT4P19013 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.04□□□□□ -1.44
KRT4P19013 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC6.04□□□□□ -1.44
KRT4P19013 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC6.04□□□□□ -1.44
KRT4P19013 AC089984.3-201ENST00000552838 363 ntBASIC6.04□□□□□ -1.44
KRT4P19013 CKS1BP1-201ENST00000555221 240 ntBASIC6.04□□□□□ -1.44
KRT4P19013 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.04□□□□□ -1.44
KRT4P19013 AC009097.3-201ENST00000563557 1018 ntBASIC6.04□□□□□ -1.44
KRT4P19013 MIR378H-201ENST00000579966 83 ntBASIC6.04□□□□□ -1.44
KRT4P19013 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.04□□□□□ -1.44
KRT4P19013 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
KRT4P19013 AC004775.1-201ENST00000607389 753 ntBASIC6.04□□□□□ -1.44
KRT4P19013 OR7A19P-201ENST00000608051 733 ntBASIC6.04□□□□□ -1.44
KRT4P19013 MIR8082-201ENST00000612488 81 ntBASIC6.04□□□□□ -1.44
KRT4P19013 MIR6849-201ENST00000618543 69 ntBASIC6.04□□□□□ -1.44
KRT4P19013 AC026367.3-201ENST00000619032 590 ntBASIC6.04□□□□□ -1.44
KRT4P19013 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
KRT4P19013 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.04□□□□□ -1.44
KRT4P19013 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms