Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC9□□□□□ -0.97
CFTRP13569 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
CFTRP13569 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
CFTRP13569 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC9□□□□□ -0.97
CFTRP13569 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
CFTRP13569 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CFTRP13569 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CFTRP13569 HYDIN2-203ENST00000614586 13885 ntBASIC8.99□□□□□ -0.97
CFTRP13569 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CFTRP13569 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
CFTRP13569 AC022164.1-201ENST00000568767 2673 ntBASIC8.99□□□□□ -0.97
CFTRP13569 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC8.99□□□□□ -0.97
CFTRP13569 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CFTRP13569 HMGB3P7-201ENST00000400214 611 ntBASIC8.99□□□□□ -0.97
CFTRP13569 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.99□□□□□ -0.97
CFTRP13569 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC8.99□□□□□ -0.97
CFTRP13569 KRT8P51-201ENST00000438938 274 ntBASIC8.99□□□□□ -0.97
CFTRP13569 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC8.99□□□□□ -0.97
CFTRP13569 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC8.99□□□□□ -0.97
CFTRP13569 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC8.99□□□□□ -0.97
CFTRP13569 AL512782.1-201ENST00000603093 364 ntBASIC8.99□□□□□ -0.97
CFTRP13569 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC8.99□□□□□ -0.97
CFTRP13569 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC8.99□□□□□ -0.97
CFTRP13569 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
CFTRP13569 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC8.99□□□□□ -0.97
CFTRP13569 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
CFTRP13569 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
CFTRP13569 Z98755.1-201ENST00000407015 1384 ntBASIC8.99□□□□□ -0.97
CFTRP13569 UGT2B24P-201ENST00000514441 1597 ntBASIC8.98□□□□□ -0.97
CFTRP13569 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
CFTRP13569 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
CFTRP13569 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
CFTRP13569 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC8.98□□□□□ -0.97
CFTRP13569 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC8.98□□□□□ -0.97
CFTRP13569 AC007064.3-201ENST00000422608 359 ntBASIC8.98□□□□□ -0.97
CFTRP13569 CNOT7P1-201ENST00000429006 852 ntBASIC8.98□□□□□ -0.97
CFTRP13569 AC068287.1-201ENST00000430283 295 ntBASIC8.98□□□□□ -0.97
CFTRP13569 FTH1P8-201ENST00000498161 514 ntBASIC8.98□□□□□ -0.97
CFTRP13569 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC8.98□□□□□ -0.97
CFTRP13569 RN7SKP21-201ENST00000516503 220 ntBASIC8.98□□□□□ -0.97
CFTRP13569 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC8.98□□□□□ -0.97
CFTRP13569 MYLK-221ENST00000583087 678 ntTSL 4 BASIC8.98□□□□□ -0.97
CFTRP13569 AC105254.2-201ENST00000603636 436 ntBASIC8.98□□□□□ -0.97
CFTRP13569 AC244107.2-201ENST00000611773 76 ntBASIC8.98□□□□□ -0.97
CFTRP13569 AC091932.2-201ENST00000623014 291 ntBASIC8.98□□□□□ -0.97
CFTRP13569 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CFTRP13569 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC8.98□□□□□ -0.97
CFTRP13569 AC005725.1-201ENST00000577346 2607 ntBASIC8.98□□□□□ -0.97
CFTRP13569 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC8.98□□□□□ -0.97
CFTRP13569 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CFTRP13569 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CFTRP13569 AL158152.1-201ENST00000602652 1435 ntBASIC8.98□□□□□ -0.97
CFTRP13569 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC8.98□□□□□ -0.97
CFTRP13569 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC8.98□□□□□ -0.97
CFTRP13569 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
CFTRP13569 AP003175.1-201ENST00000641383 6658 ntBASIC8.98□□□□□ -0.97
CFTRP13569 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CFTRP13569 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CFTRP13569 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CFTRP13569 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CFTRP13569 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CFTRP13569 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC8.98□□□□□ -0.97
CFTRP13569 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC8.98□□□□□ -0.97
CFTRP13569 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CFTRP13569 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CFTRP13569 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC8.98□□□□□ -0.97
CFTRP13569 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
CFTRP13569 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CFTRP13569 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
CFTRP13569 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC8.98□□□□□ -0.97
CFTRP13569 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC8.97□□□□□ -0.97
CFTRP13569 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CFTRP13569 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC8.97□□□□□ -0.97
CFTRP13569 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC8.97□□□□□ -0.97
CFTRP13569 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CFTRP13569 BX284613.1-201ENST00000452221 1641 ntBASIC8.97□□□□□ -0.97
CFTRP13569 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
CFTRP13569 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
CFTRP13569 Y_RNA.126-201ENST00000363382 111 ntBASIC8.97□□□□□ -0.97
CFTRP13569 RPS3AP23-201ENST00000401762 784 ntBASIC8.97□□□□□ -0.97
CFTRP13569 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC8.97□□□□□ -0.97
CFTRP13569 MTCYBP21-201ENST00000443300 1113 ntBASIC8.97□□□□□ -0.97
CFTRP13569 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CFTRP13569 AC006427.1-201ENST00000514359 712 ntBASIC8.97□□□□□ -0.97
CFTRP13569 SCARNA20.4-201ENST00000516969 131 ntBASIC8.97□□□□□ -0.97
CFTRP13569 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC8.97□□□□□ -0.97
CFTRP13569 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC8.97□□□□□ -0.97
CFTRP13569 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC8.97□□□□□ -0.97
CFTRP13569 AP003400.3-201ENST00000624904 346 ntBASIC8.97□□□□□ -0.97
CFTRP13569 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
CFTRP13569 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
CFTRP13569 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CFTRP13569 AC016745.2-201ENST00000608834 3443 ntBASIC8.97□□□□□ -0.97
CFTRP13569 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC8.97□□□□□ -0.97
CFTRP13569 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC8.97□□□□□ -0.97
CFTRP13569 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
CFTRP13569 AC009948.3-201ENST00000603415 1798 ntBASIC8.97□□□□□ -0.97
CFTRP13569 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
CFTRP13569 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC8.96□□□□□ -0.97
CFTRP13569 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC8.96□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms