Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC4P09017 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC4P09017 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HOXC4P09017 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC4P09017 U3.7-201ENST00000363668 216 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC4P09017 NPM1P38-201ENST00000403835 865 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 RNA5SP487-201ENST00000410186 122 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 RNU4-34P-201ENST00000410431 124 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC4P09017 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC4P09017 OR52B5P-201ENST00000435337 951 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 LINC02210-201ENST00000444561 288 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC4P09017 UBA52P7-201ENST00000486088 380 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 RPEP1-201ENST00000504507 658 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 AC093763.2-201ENST00000505334 1223 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXC4P09017 GLUD1P3-202ENST00000508551 200 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC4P09017 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.38□□□□□ -1.55
HOXC4P09017 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC4P09017 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.38□□□□□ -1.55
HOXC4P09017 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC4P09017 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXC4P09017 HMGB1P40-201ENST00000525121 540 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 AC005341.1-201ENST00000571086 708 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 SDR42E1P1-201ENST00000611327 477 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 AC015712.7-201ENST00000615211 635 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 AC021766.1-201ENST00000624404 741 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC4P09017 OR52B5P-202ENST00000641118 1110 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HOXC4P09017 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC4P09017 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC4P09017 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXC4P09017 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC4P09017 MAPK10-338ENST00000641647 3362 ntBASIC5.38□□□□□ -1.55
HOXC4P09017 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXC4P09017 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC4P09017 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC4P09017 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXC4P09017 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC4P09017 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC4P09017 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC4P09017 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
HOXC4P09017 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC4P09017 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC4P09017 U3.10-201ENST00000364459 214 ntBASIC5.37□□□□□ -1.55
HOXC4P09017 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC4P09017 RNU6-171P-201ENST00000384354 107 ntBASIC5.37□□□□□ -1.55
HOXC4P09017 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HOXC4P09017 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC4P09017 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXC4P09017 BRWD1P3-201ENST00000428816 390 ntBASIC5.37□□□□□ -1.55
HOXC4P09017 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC4P09017 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXC4P09017 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXC4P09017 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXC4P09017 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC4P09017 RPL7P6-201ENST00000480903 738 ntBASIC5.37□□□□□ -1.55
HOXC4P09017 AC079841.1-201ENST00000481228 950 ntBASIC5.37□□□□□ -1.55
HOXC4P09017 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXC4P09017 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.37□□□□□ -1.55
HOXC4P09017 AC006499.3-201ENST00000506077 748 ntBASIC5.37□□□□□ -1.55
HOXC4P09017 AC097486.1-201ENST00000515331 210 ntBASIC5.37□□□□□ -1.55
HOXC4P09017 AC020937.1-201ENST00000519677 1013 ntBASIC5.37□□□□□ -1.55
HOXC4P09017 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.37□□□□□ -1.55
HOXC4P09017 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.37□□□□□ -1.55
HOXC4P09017 AC007448.1-201ENST00000582714 234 ntBASIC5.37□□□□□ -1.55
HOXC4P09017 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXC4P09017 AC009237.13-201ENST00000603193 276 ntBASIC5.37□□□□□ -1.55
HOXC4P09017 AC109583.2-201ENST00000617367 129 ntBASIC5.37□□□□□ -1.55
HOXC4P09017 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC4P09017 SAMMSON-227ENST00000642114 1199 ntBASIC5.37□□□□□ -1.55
HOXC4P09017 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC4P09017 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC4P09017 AC092451.3-201ENST00000625067 1343 ntBASIC5.37□□□□□ -1.55
HOXC4P09017 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC4P09017 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXC4P09017 AC006206.1-201ENST00000544842 3387 ntBASIC5.37□□□□□ -1.55
HOXC4P09017 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HOXC4P09017 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXC4P09017 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HOXC4P09017 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC4P09017 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC4P09017 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC4P09017 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC4P09017 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC4P09017 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
HOXC4P09017 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC4P09017 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HOXC4P09017 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC4P09017 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
HOXC4P09017 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC4P09017 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC4P09017 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC4P09017 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC4P09017 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC4P09017 SNORA16A-201ENST00000384342 137 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms