Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 PNKDP1-201ENST00000435914 430 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 RN7SKP46-201ENST00000515942 234 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 PCNAP4-201ENST00000532690 730 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 AC121758.1-202ENST00000556917 658 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 AC011500.1-201ENST00000601963 469 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 AC124916.2-201ENST00000604416 224 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 AC108673.3-201ENST00000609183 335 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 MIR6793-201ENST00000612376 63 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 AC025574.2-201ENST00000615621 514 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 AL589935.2-201ENST00000616471 1231 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 AC120036.2-201ENST00000509729 1474 ntBASIC4.67□□□□□ -1.66
HLA-DQB1P01920 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HLA-DQB1P01920 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 CASC19-238ENST00000641523 1558 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AC026523.2-201ENST00000625039 7739 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 RN7SKP250-201ENST00000363924 321 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 RNA5SP500-201ENST00000364486 119 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AL034417.1-201ENST00000399343 800 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 BX284632.2-201ENST00000421091 399 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AC092447.2-201ENST00000435487 669 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AL512605.1-202ENST00000441919 381 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AL359955.2-201ENST00000445380 353 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AC009963.3-201ENST00000458090 486 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 RN7SL568P-201ENST00000493069 298 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AC105031.1-201ENST00000518550 476 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 HNRNPRP2-201ENST00000528421 743 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 MIR8069-1-201ENST00000616627 86 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 MIR8069-2-201ENST00000621412 86 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AC099654.6-201ENST00000636487 512 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AC020633.1-201ENST00000468439 2247 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
HLA-DQB1P01920 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.66□□□□□ -1.66
HLA-DQB1P01920 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
HLA-DQB1P01920 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.65□□□□□ -1.66
HLA-DQB1P01920 AL132656.3-201ENST00000606384 1595 ntBASIC4.65□□□□□ -1.66
HLA-DQB1P01920 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQB1P01920 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQB1P01920 RBPJP2-201ENST00000618187 1444 ntBASIC4.65□□□□□ -1.66
HLA-DQB1P01920 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.65□□□□□ -1.66
HLA-DQB1P01920 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
HLA-DQB1P01920 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HLA-DQB1P01920 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
HLA-DQB1P01920 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.65□□□□□ -1.66
HLA-DQB1P01920 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
HLA-DQB1P01920 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HLA-DQB1P01920 RN7SKP28-201ENST00000364770 305 ntBASIC4.65□□□□□ -1.67
HLA-DQB1P01920 DBIP1-201ENST00000401435 260 ntBASIC4.65□□□□□ -1.67
HLA-DQB1P01920 RN7SKP86-201ENST00000410454 332 ntBASIC4.65□□□□□ -1.67
HLA-DQB1P01920 AC010740.1-201ENST00000417035 684 ntBASIC4.65□□□□□ -1.67
HLA-DQB1P01920 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.65□□□□□ -1.67
HLA-DQB1P01920 AL139158.1-201ENST00000424719 340 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms