Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
MBD4O95243 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
MBD4O95243 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MBD4O95243 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.66□□□□□ -1.34
MBD4O95243 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MBD4O95243 AC245100.2-201ENST00000454544 1679 ntBASIC6.66□□□□□ -1.34
MBD4O95243 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MBD4O95243 RNA5SP319-201ENST00000362768 119 ntBASIC6.66□□□□□ -1.34
MBD4O95243 RNU4-2-201ENST00000365668 141 ntBASIC6.66□□□□□ -1.34
MBD4O95243 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.66□□□□□ -1.34
MBD4O95243 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.66□□□□□ -1.34
MBD4O95243 DHFRP5-201ENST00000406944 564 ntBASIC6.66□□□□□ -1.34
MBD4O95243 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.66□□□□□ -1.34
MBD4O95243 METTL15P3-201ENST00000415522 1221 ntBASIC6.66□□□□□ -1.34
MBD4O95243 ARAFP1-201ENST00000422172 605 ntBASIC6.66□□□□□ -1.34
MBD4O95243 MAPRE1P3-201ENST00000435438 796 ntBASIC6.66□□□□□ -1.34
MBD4O95243 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.66□□□□□ -1.34
MBD4O95243 AC092106.1-201ENST00000444291 373 ntBASIC6.66□□□□□ -1.34
MBD4O95243 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.66□□□□□ -1.34
MBD4O95243 SIAH1P1-201ENST00000479411 923 ntBASIC6.66□□□□□ -1.34
MBD4O95243 AC108693.1-201ENST00000496068 432 ntBASIC6.66□□□□□ -1.34
MBD4O95243 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
MBD4O95243 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.66□□□□□ -1.34
MBD4O95243 IGKV2-18-201ENST00000522607 343 ntBASIC6.66□□□□□ -1.34
MBD4O95243 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.66□□□□□ -1.34
MBD4O95243 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.66□□□□□ -1.34
MBD4O95243 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.66□□□□□ -1.34
MBD4O95243 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.66□□□□□ -1.34
MBD4O95243 AC009268.1-201ENST00000561352 1203 ntBASIC6.66□□□□□ -1.34
MBD4O95243 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.66□□□□□ -1.34
MBD4O95243 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.66□□□□□ -1.34
MBD4O95243 AC245128.3-201ENST00000594721 748 ntBASIC6.66□□□□□ -1.34
MBD4O95243 AC022387.2-201ENST00000604050 448 ntBASIC6.66□□□□□ -1.34
MBD4O95243 SUGT1P3-202ENST00000604259 383 ntBASIC6.66□□□□□ -1.34
MBD4O95243 AP000864.1-201ENST00000609424 650 ntBASIC6.66□□□□□ -1.34
MBD4O95243 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.66□□□□□ -1.34
MBD4O95243 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6.66□□□□□ -1.34
MBD4O95243 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.66□□□□□ -1.34
MBD4O95243 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
MBD4O95243 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
MBD4O95243 AC144833.1-201ENST00000567953 4089 ntBASIC6.66□□□□□ -1.34
MBD4O95243 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
MBD4O95243 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.66□□□□□ -1.34
MBD4O95243 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
MBD4O95243 AL158152.1-201ENST00000602652 1435 ntBASIC6.66□□□□□ -1.34
MBD4O95243 AC087516.1-201ENST00000561236 2428 ntBASIC6.66□□□□□ -1.34
MBD4O95243 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
MBD4O95243 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
MBD4O95243 MT-RNR2-201ENST00000387347 1559 ntBASIC6.65□□□□□ -1.34
MBD4O95243 UGT2B24P-201ENST00000514441 1597 ntBASIC6.65□□□□□ -1.34
MBD4O95243 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
MBD4O95243 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
MBD4O95243 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
MBD4O95243 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
MBD4O95243 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.65□□□□□ -1.34
MBD4O95243 DNM1P47-203ENST00000571780 12667 ntBASIC6.65□□□□□ -1.34
MBD4O95243 HSPD1P7-201ENST00000447985 1686 ntBASIC6.65□□□□□ -1.34
MBD4O95243 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
MBD4O95243 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
MBD4O95243 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
MBD4O95243 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.65□□□□□ -1.34
MBD4O95243 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
MBD4O95243 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.65□□□□□ -1.34
MBD4O95243 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
MBD4O95243 RN7SKP162-201ENST00000363605 345 ntBASIC6.65□□□□□ -1.34
MBD4O95243 RN7SKP59-201ENST00000410520 314 ntBASIC6.65□□□□□ -1.34
MBD4O95243 AC007161.1-204ENST00000423039 460 ntBASIC6.65□□□□□ -1.34
MBD4O95243 PRUNEP1-201ENST00000425846 705 ntBASIC6.65□□□□□ -1.34
MBD4O95243 MTCO1P51-201ENST00000427672 1060 ntBASIC6.65□□□□□ -1.34
MBD4O95243 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.65□□□□□ -1.34
MBD4O95243 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.65□□□□□ -1.34
MBD4O95243 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.65□□□□□ -1.34
MBD4O95243 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.65□□□□□ -1.34
MBD4O95243 UBA52P7-201ENST00000486088 380 ntBASIC6.65□□□□□ -1.34
MBD4O95243 EIF1P7-201ENST00000487533 337 ntBASIC6.65□□□□□ -1.34
MBD4O95243 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
MBD4O95243 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
MBD4O95243 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.65□□□□□ -1.34
MBD4O95243 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.65□□□□□ -1.34
MBD4O95243 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
MBD4O95243 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.65□□□□□ -1.34
MBD4O95243 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.65□□□□□ -1.34
MBD4O95243 AL353729.2-201ENST00000605859 1249 ntBASIC6.65□□□□□ -1.34
MBD4O95243 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
MBD4O95243 AC005840.5-201ENST00000619166 599 ntBASIC6.65□□□□□ -1.34
MBD4O95243 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
MBD4O95243 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.65□□□□□ -1.34
MBD4O95243 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
MBD4O95243 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
MBD4O95243 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.35
MBD4O95243 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
MBD4O95243 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.65□□□□□ -1.35
MBD4O95243 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
MBD4O95243 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
MBD4O95243 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
MBD4O95243 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.64□□□□□ -1.35
MBD4O95243 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
MBD4O95243 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
MBD4O95243 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.64□□□□□ -1.35
MBD4O95243 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms