Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC004923.2-201ENST00000529649 369 ntBASIC5.35□□□□□ -1.55
NKX2-2O95096 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX2-2O95096 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX2-2O95096 AC093510.2-201ENST00000562820 896 ntBASIC5.35□□□□□ -1.55
NKX2-2O95096 AC096996.1-201ENST00000563813 325 ntBASIC5.35□□□□□ -1.55
NKX2-2O95096 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX2-2O95096 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX2-2O95096 AC021483.2-201ENST00000567415 758 ntBASIC5.35□□□□□ -1.55
NKX2-2O95096 AC134669.1-201ENST00000581275 672 ntBASIC5.35□□□□□ -1.55
NKX2-2O95096 MIR4433B-201ENST00000581329 102 ntBASIC5.35□□□□□ -1.55
NKX2-2O95096 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX2-2O95096 AP001357.1-201ENST00000586304 1053 ntBASIC5.35□□□□□ -1.55
NKX2-2O95096 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX2-2O95096 DNAJC19P3-201ENST00000594491 331 ntBASIC5.35□□□□□ -1.55
NKX2-2O95096 FAM27E4-201ENST00000605259 342 ntBASIC5.35□□□□□ -1.55
NKX2-2O95096 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.35□□□□□ -1.55
NKX2-2O95096 AL352984.2-202ENST00000613699 155 ntBASIC5.35□□□□□ -1.55
NKX2-2O95096 AC021422.1-201ENST00000621212 473 ntBASIC5.35□□□□□ -1.55
NKX2-2O95096 AC022919.1-201ENST00000624979 626 ntBASIC5.35□□□□□ -1.55
NKX2-2O95096 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.35□□□□□ -1.55
NKX2-2O95096 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.35□□□□□ -1.55
NKX2-2O95096 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NKX2-2O95096 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NKX2-2O95096 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NKX2-2O95096 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NKX2-2O95096 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NKX2-2O95096 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NKX2-2O95096 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NKX2-2O95096 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
NKX2-2O95096 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
NKX2-2O95096 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
NKX2-2O95096 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.34□□□□□ -1.55
NKX2-2O95096 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NKX2-2O95096 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.34□□□□□ -1.55
NKX2-2O95096 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NKX2-2O95096 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
NKX2-2O95096 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NKX2-2O95096 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
NKX2-2O95096 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
NKX2-2O95096 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.34□□□□□ -1.55
NKX2-2O95096 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.34□□□□□ -1.55
NKX2-2O95096 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NKX2-2O95096 RNU4-7P-201ENST00000364758 141 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 MIR137-201ENST00000385223 102 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.34□□□□□ -1.55
NKX2-2O95096 OR2W4P-201ENST00000406496 926 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 RNU2-18P-201ENST00000411224 162 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.34□□□□□ -1.55
NKX2-2O95096 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NKX2-2O95096 AK4P4-201ENST00000419465 646 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 RPL24P2-201ENST00000421023 475 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 UBE2D3P3-201ENST00000426992 425 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 AC242426.1-201ENST00000435270 960 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 ARAFP2-201ENST00000440565 559 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 DNAJC19P5-201ENST00000443295 316 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 AC090058.1-201ENST00000498788 435 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.34□□□□□ -1.55
NKX2-2O95096 BTG4P1-201ENST00000510421 183 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.34□□□□□ -1.55
NKX2-2O95096 IGLV3-30-201ENST00000524362 298 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.34□□□□□ -1.55
NKX2-2O95096 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.34□□□□□ -1.55
NKX2-2O95096 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.34□□□□□ -1.55
NKX2-2O95096 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NKX2-2O95096 OSBPL9P3-201ENST00000534523 595 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NKX2-2O95096 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.34□□□□□ -1.55
NKX2-2O95096 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.34□□□□□ -1.55
NKX2-2O95096 AC068305.2-201ENST00000550567 1205 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 AC087888.1-201ENST00000550884 1254 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.34□□□□□ -1.55
NKX2-2O95096 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.34□□□□□ -1.55
NKX2-2O95096 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.34□□□□□ -1.55
NKX2-2O95096 COX6CP7-201ENST00000597056 208 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 AL499605.1-201ENST00000604628 403 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 AC004241.3-201ENST00000611728 517 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 AL035661.1-201ENST00000620459 1144 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 AC022400.9-201ENST00000623633 273 ntBASIC5.34□□□□□ -1.55
NKX2-2O95096 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.34□□□□□ -1.55
NKX2-2O95096 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
NKX2-2O95096 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
NKX2-2O95096 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
NKX2-2O95096 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
NKX2-2O95096 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 AL359715.4-201ENST00000606629 1436 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NKX2-2O95096 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NKX2-2O95096 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NKX2-2O95096 RNU1-136P-201ENST00000384181 164 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 RNU6-729P-201ENST00000384399 107 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 MIR130A-201ENST00000385274 89 ntBASIC5.33□□□□□ -1.56
NKX2-2O95096 OR7E156P-201ENST00000400303 464 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms