Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AP003033.2-201ENST00000528901 805 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.45□□□□□ -1.54
SHOX2O60902 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.45□□□□□ -1.54
SHOX2O60902 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHOX2O60902 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHOX2O60902 AL499605.1-201ENST00000604628 403 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.45□□□□□ -1.54
SHOX2O60902 AL353600.1-201ENST00000608148 251 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 MIR8069-1-201ENST00000616627 86 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 MIR6729-201ENST00000618194 65 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.45□□□□□ -1.54
SHOX2O60902 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.45□□□□□ -1.54
SHOX2O60902 AL591926.1-201ENST00000620542 217 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 MIR8069-2-201ENST00000621412 86 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHOX2O60902 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.45□□□□□ -1.54
SHOX2O60902 AC007603.3-201ENST00000636915 979 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 AC008691.1-209ENST00000642094 814 ntBASIC5.45□□□□□ -1.54
SHOX2O60902 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.45□□□□□ -1.54
SHOX2O60902 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
SHOX2O60902 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHOX2O60902 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.45□□□□□ -1.54
SHOX2O60902 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHOX2O60902 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.45□□□□□ -1.54
SHOX2O60902 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHOX2O60902 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHOX2O60902 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHOX2O60902 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHOX2O60902 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.44□□□□□ -1.54
SHOX2O60902 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SHOX2O60902 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHOX2O60902 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.44□□□□□ -1.54
SHOX2O60902 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHOX2O60902 RNA5SP30-201ENST00000365552 115 ntBASIC5.44□□□□□ -1.54
SHOX2O60902 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.44□□□□□ -1.54
SHOX2O60902 NENFP1-201ENST00000419476 466 ntBASIC5.44□□□□□ -1.54
SHOX2O60902 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.44□□□□□ -1.54
SHOX2O60902 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.44□□□□□ -1.54
SHOX2O60902 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHOX2O60902 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.44□□□□□ -1.54
SHOX2O60902 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.44□□□□□ -1.54
SHOX2O60902 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHOX2O60902 RN7SL170P-201ENST00000487098 295 ntBASIC5.44□□□□□ -1.54
SHOX2O60902 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.44□□□□□ -1.54
SHOX2O60902 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.44□□□□□ -1.54
SHOX2O60902 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.44□□□□□ -1.54
SHOX2O60902 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.44□□□□□ -1.54
SHOX2O60902 AC105031.1-201ENST00000518550 476 ntBASIC5.44□□□□□ -1.54
SHOX2O60902 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHOX2O60902 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.44□□□□□ -1.54
SHOX2O60902 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.44□□□□□ -1.54
SHOX2O60902 AC004232.2-201ENST00000574245 821 ntBASIC5.44□□□□□ -1.54
SHOX2O60902 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.44□□□□□ -1.54
SHOX2O60902 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.44□□□□□ -1.54
SHOX2O60902 AP000769.2-201ENST00000602344 396 ntBASIC5.44□□□□□ -1.54
SHOX2O60902 RNF138P2-201ENST00000603490 592 ntBASIC5.44□□□□□ -1.54
SHOX2O60902 AF287957.1-201ENST00000607368 1595 ntBASIC5.44□□□□□ -1.54
SHOX2O60902 AL080312.2-201ENST00000613001 630 ntBASIC5.44□□□□□ -1.54
SHOX2O60902 AC012676.3-201ENST00000614983 479 ntBASIC5.44□□□□□ -1.54
SHOX2O60902 AC090607.5-201ENST00000615692 224 ntBASIC5.44□□□□□ -1.54
SHOX2O60902 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.44□□□□□ -1.54
SHOX2O60902 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHOX2O60902 XKRY2-202ENST00000623874 1581 ntBASIC5.44□□□□□ -1.54
SHOX2O60902 AC073593.1-201ENST00000624500 411 ntBASIC5.44□□□□□ -1.54
SHOX2O60902 XKRY-202ENST00000624960 1581 ntBASIC5.44□□□□□ -1.54
SHOX2O60902 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.44□□□□□ -1.54
SHOX2O60902 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.44□□□□□ -1.54
SHOX2O60902 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHOX2O60902 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.44□□□□□ -1.54
SHOX2O60902 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SHOX2O60902 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.44□□□□□ -1.54
SHOX2O60902 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SHOX2O60902 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHOX2O60902 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.44□□□□□ -1.54
SHOX2O60902 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHOX2O60902 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SHOX2O60902 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
SHOX2O60902 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.44□□□□□ -1.54
SHOX2O60902 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
SHOX2O60902 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHOX2O60902 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
SHOX2O60902 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.43□□□□□ -1.54
SHOX2O60902 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHOX2O60902 RNU1-19P-201ENST00000363306 165 ntBASIC5.43□□□□□ -1.54
SHOX2O60902 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SHOX2O60902 AL009179.1-201ENST00000406085 265 ntBASIC5.43□□□□□ -1.54
SHOX2O60902 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.43□□□□□ -1.54
SHOX2O60902 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.43□□□□□ -1.54
SHOX2O60902 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.43□□□□□ -1.54
SHOX2O60902 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.43□□□□□ -1.54
SHOX2O60902 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.43□□□□□ -1.54
SHOX2O60902 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.43□□□□□ -1.54
SHOX2O60902 GEMIN2P1-201ENST00000454246 752 ntBASIC5.43□□□□□ -1.54
SHOX2O60902 AC004890.1-201ENST00000461005 181 ntBASIC5.43□□□□□ -1.54
SHOX2O60902 AP000942.1-201ENST00000463969 747 ntBASIC5.43□□□□□ -1.54
SHOX2O60902 AC112206.1-201ENST00000468416 477 ntBASIC5.43□□□□□ -1.54
SHOX2O60902 AC022795.1-201ENST00000473808 480 ntBASIC5.43□□□□□ -1.54
SHOX2O60902 AC093827.1-201ENST00000480094 861 ntBASIC5.43□□□□□ -1.54
SHOX2O60902 AC099521.1-201ENST00000482557 334 ntBASIC5.43□□□□□ -1.54
SHOX2O60902 AC108043.1-201ENST00000512696 574 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms