Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 HMGB1P50-201ENST00000605814 607 ntBASIC8.32□□□□□ -1.08
SNPHO15079 AC009229.3-201ENST00000608056 282 ntBASIC8.32□□□□□ -1.08
SNPHO15079 AC007336.2-201ENST00000611626 557 ntBASIC8.32□□□□□ -1.08
SNPHO15079 SYN3-213ENST00000619146 561 ntTSL 5 BASIC8.32□□□□□ -1.08
SNPHO15079 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC8.32□□□□□ -1.08
SNPHO15079 HEPACAM2-203ENST00000440868 2060 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SNPHO15079 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC8.32□□□□□ -1.08
SNPHO15079 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNPHO15079 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNPHO15079 PRAMEF10-201ENST00000235347 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNPHO15079 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC8.32□□□□□ -1.08
SNPHO15079 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNPHO15079 ZNF285B-201ENST00000561698 1767 ntBASIC8.32□□□□□ -1.08
SNPHO15079 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
SNPHO15079 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SNPHO15079 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.32□□□□□ -1.08
SNPHO15079 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNPHO15079 MAPK10-285ENST00000641207 2746 ntBASIC8.31□□□□□ -1.08
SNPHO15079 USP4-202ENST00000351842 3222 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNPHO15079 MATN2-208ENST00000520016 3495 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNPHO15079 AL049780.3-201ENST00000624612 1583 ntBASIC8.31□□□□□ -1.08
SNPHO15079 SLC17A1-201ENST00000244527 1844 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
SNPHO15079 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
SNPHO15079 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC8.31□□□□□ -1.08
SNPHO15079 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNPHO15079 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
SNPHO15079 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC8.31□□□□□ -1.08
SNPHO15079 MKNK1-AS1-201ENST00000602433 2445 ntTSL 2 BASIC8.31□□□□□ -1.08
SNPHO15079 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
SNPHO15079 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNPHO15079 SLC17A2-202ENST00000360488 2270 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNPHO15079 LINC02072-201ENST00000441895 2645 ntTSL 2 BASIC8.31□□□□□ -1.08
SNPHO15079 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNPHO15079 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNPHO15079 RPL32-201ENST00000273223 567 ntTSL 3 BASIC8.31□□□□□ -1.08
SNPHO15079 TMSB4XP2-201ENST00000335179 210 ntBASIC8.31□□□□□ -1.08
SNPHO15079 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNPHO15079 SNORD3E-201ENST00000362899 217 ntBASIC8.31□□□□□ -1.08
SNPHO15079 RNU1-7P-201ENST00000364105 164 ntBASIC8.31□□□□□ -1.08
SNPHO15079 RNY1-201ENST00000364228 113 ntBASIC8.31□□□□□ -1.08
SNPHO15079 RNA5SP69-201ENST00000364477 117 ntBASIC8.31□□□□□ -1.08
SNPHO15079 RNU6-215P-201ENST00000365169 102 ntBASIC8.31□□□□□ -1.08
SNPHO15079 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SNPHO15079 RNA5SP36-201ENST00000410197 133 ntBASIC8.31□□□□□ -1.08
SNPHO15079 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC8.31□□□□□ -1.08
SNPHO15079 AL672212.1-201ENST00000422246 400 ntBASIC8.31□□□□□ -1.08
SNPHO15079 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
SNPHO15079 AL133410.1-202ENST00000431981 472 ntTSL 3 BASIC8.31□□□□□ -1.08
SNPHO15079 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC8.31□□□□□ -1.08
SNPHO15079 AC005588.1-201ENST00000439168 162 ntBASIC8.31□□□□□ -1.08
SNPHO15079 CRIP1P4-201ENST00000442565 229 ntBASIC8.31□□□□□ -1.08
SNPHO15079 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC8.31□□□□□ -1.08
SNPHO15079 AL157827.1-201ENST00000447622 132 ntBASIC8.31□□□□□ -1.08
SNPHO15079 SLC31A1P1-201ENST00000451221 567 ntBASIC8.31□□□□□ -1.08
SNPHO15079 AC019080.2-201ENST00000453859 394 ntBASIC8.31□□□□□ -1.08
SNPHO15079 RPL37P3-201ENST00000456825 293 ntBASIC8.31□□□□□ -1.08
SNPHO15079 RPL12P37-201ENST00000486874 495 ntBASIC8.31□□□□□ -1.08
SNPHO15079 AL590867.2-201ENST00000492974 447 ntBASIC8.31□□□□□ -1.08
SNPHO15079 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC8.31□□□□□ -1.08
SNPHO15079 AL645949.1-201ENST00000510094 324 ntBASIC8.31□□□□□ -1.08
SNPHO15079 AC022296.1-201ENST00000512176 682 ntBASIC8.31□□□□□ -1.08
SNPHO15079 RNU7-200P-201ENST00000516105 62 ntBASIC8.31□□□□□ -1.08
SNPHO15079 IGHVIII-51-1-201ENST00000519403 302 ntBASIC8.31□□□□□ -1.08
SNPHO15079 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC8.31□□□□□ -1.08
SNPHO15079 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC8.31□□□□□ -1.08
SNPHO15079 AP003396.2-201ENST00000533726 1297 ntBASIC8.31□□□□□ -1.08
SNPHO15079 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNPHO15079 AC005842.1-201ENST00000537149 678 ntTSL 3 BASIC8.31□□□□□ -1.08
SNPHO15079 BRWD1P2-201ENST00000546823 340 ntBASIC8.31□□□□□ -1.08
SNPHO15079 AC055716.3-201ENST00000547533 761 ntTSL 3 BASIC8.31□□□□□ -1.08
SNPHO15079 CD63-206ENST00000548160 648 ntTSL 2 BASIC8.31□□□□□ -1.08
SNPHO15079 BICD1-206ENST00000551086 423 ntTSL 3 BASIC8.31□□□□□ -1.08
SNPHO15079 AC106028.1-201ENST00000554322 526 ntBASIC8.31□□□□□ -1.08
SNPHO15079 AC127381.1-201ENST00000555979 939 ntBASIC8.31□□□□□ -1.08
SNPHO15079 AC007907.1-201ENST00000557953 451 ntTSL 3 BASIC8.31□□□□□ -1.08
SNPHO15079 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC8.31□□□□□ -1.08
SNPHO15079 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SNPHO15079 AC119751.8-201ENST00000597032 156 ntBASIC8.31□□□□□ -1.08
SNPHO15079 AC136475.8-201ENST00000602809 386 ntTSL 5 BASIC8.31□□□□□ -1.08
SNPHO15079 AP001823.1-201ENST00000604056 1003 ntBASIC8.31□□□□□ -1.08
SNPHO15079 FAM27E4-201ENST00000605259 342 ntBASIC8.31□□□□□ -1.08
SNPHO15079 BX664608.1-201ENST00000610519 487 ntBASIC8.31□□□□□ -1.08
SNPHO15079 FAM27E3-202ENST00000614611 340 ntBASIC8.31□□□□□ -1.08
SNPHO15079 ZNF512-202ENST00000379717 3417 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
SNPHO15079 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNPHO15079 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNPHO15079 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC8.31□□□□□ -1.08
SNPHO15079 TMEM161B-205ENST00000506536 2328 ntTSL 5 BASIC8.31□□□□□ -1.08
SNPHO15079 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SNPHO15079 RNASE9-207ENST00000555230 2668 ntAPPRIS P3 TSL 2 BASIC8.31□□□□□ -1.08
SNPHO15079 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNPHO15079 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC8.31□□□□□ -1.08
SNPHO15079 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SNPHO15079 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
SNPHO15079 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SNPHO15079 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC8.3□□□□□ -1.08
SNPHO15079 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SNPHO15079 ZNF347-207ENST00000601469 2812 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
SNPHO15079 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.3□□□□□ -1.08
SNPHO15079 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms