Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 BIN2P1-201ENST00000504996 1530 ntBASIC6.75□□□□□ -1.33
CCDC66A2RUB6 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC66A2RUB6 AC027279.4-201ENST00000624371 2072 ntBASIC6.75□□□□□ -1.33
CCDC66A2RUB6 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
CCDC66A2RUB6 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC66A2RUB6 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCDC66A2RUB6 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.75□□□□□ -1.33
CCDC66A2RUB6 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
CCDC66A2RUB6 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 OR9K1P-202ENST00000641111 3217 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 PPIAP24-201ENST00000328558 471 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 RNA5SP478-201ENST00000364657 115 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 MRPS6P2-201ENST00000381143 370 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AL391419.1-201ENST00000398901 1275 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AL603865.2-201ENST00000401679 213 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 NACAP7-201ENST00000407371 609 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 UBE2V1P14-201ENST00000415815 558 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AL121878.1-201ENST00000418638 859 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 E2F6P1-201ENST00000428850 745 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 RPL3P11-201ENST00000434028 1146 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AL121578.2-201ENST00000448797 447 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 NPM1P19-201ENST00000450070 712 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 CTSLP6-201ENST00000458273 1002 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC093752.1-206ENST00000511823 336 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AP002004.1-206ENST00000532441 876 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC125611.1-201ENST00000549563 229 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC089984.3-201ENST00000552838 363 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC025283.1-201ENST00000572039 734 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 Z94722.1-201ENST00000604328 474 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC025588.2-201ENST00000604851 466 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 SNORD96A-201ENST00000606577 79 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 AC097063.1-201ENST00000426714 1797 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 HSPD1P7-201ENST00000447985 1686 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 CIR1P2-201ENST00000514821 1342 ntBASIC6.74□□□□□ -1.33
CCDC66A2RUB6 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CCDC66A2RUB6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 RNU5B-1-201ENST00000363286 116 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 RN7SKP191-201ENST00000364713 306 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 RN7SKP69-201ENST00000365390 305 ntBASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC66A2RUB6 AC245036.1-201ENST00000391727 309 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms