Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SAMMSON-227ENST00000642114 1199 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC068860.1-201ENST00000623701 3736 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 AC130464.1-201ENST00000416201 1500 ntBASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHB11Q9Y5F2 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 TRIM60P14-201ENST00000513444 1419 ntBASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 AC090771.1-201ENST00000585803 1618 ntBASIC7.46□□□□□ -1.21
PCDHB11Q9Y5F2 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 FAM32BP-201ENST00000344033 333 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 RNU6-462P-201ENST00000362659 105 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 RNA5SP218-201ENST00000363188 109 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 RNA5SP442-201ENST00000365050 107 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 RNU6-483P-201ENST00000384088 108 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AL450992.3-201ENST00000413192 568 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 RANP6-201ENST00000413691 644 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 RPLP1P10-201ENST00000413972 339 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 PPIL1P1-201ENST00000423936 499 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 BMS1P19-201ENST00000433925 393 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AL590682.1-201ENST00000437248 344 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AC239800.1-201ENST00000442049 719 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AC093166.3-201ENST00000448785 303 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 NPM1P39-201ENST00000449818 867 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 FTH1P7-201ENST00000450676 552 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AC093799.1-201ENST00000452411 499 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 RPL38P1-201ENST00000460914 211 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 RN7SL55P-201ENST00000464534 297 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AC087385.2-201ENST00000477729 498 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AC012170.1-201ENST00000495139 359 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AC114981.1-201ENST00000503897 678 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AC111193.1-201ENST00000504097 155 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 MRPL49P1-201ENST00000505951 535 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 RNA5SP216-201ENST00000516111 123 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 Y_RNA.693-201ENST00000516641 110 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 RNA5SP135-201ENST00000517019 125 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 UBE2CP1-201ENST00000557130 554 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AC090415.1-201ENST00000581877 847 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AC009977.1-201ENST00000586015 570 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 KC877982.1-201ENST00000602313 470 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 LLPHP1-201ENST00000603571 367 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 BNIP3P10-201ENST00000605360 577 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AL136295.6-201ENST00000610486 658 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 FAM27E3-202ENST00000614611 340 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AC073862.4-201ENST00000622982 854 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 OR7E11P-202ENST00000642027 1491 ntBASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHB11Q9Y5F2 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms