Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 BX119321.1-201ENST00000428912 797 ntBASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 ELOCP13-201ENST00000443934 329 ntBASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 RPL23AP60-201ENST00000450011 454 ntBASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 RPS26P41-201ENST00000450370 284 ntBASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 MTND2P8-201ENST00000450555 1025 ntBASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 RN7SL57P-201ENST00000493687 290 ntBASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 FTH1P8-201ENST00000498161 514 ntBASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 AC091078.2-201ENST00000557145 559 ntBASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 AL450270.1-201ENST00000606160 391 ntBASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 AL352984.2-202ENST00000613699 155 ntBASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 AL645568.2-201ENST00000432815 1337 ntBASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CTDP1Q9Y5B0 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC027279.1-201ENST00000568885 4284 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC005034.3-201ENST00000604845 1747 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 ANAPC10P1-201ENST00000395991 556 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 OR2W4P-201ENST00000406496 926 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 CDY17P-201ENST00000414121 1282 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 ZNF736P7Y-201ENST00000425158 820 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 BMS1P10-201ENST00000443754 1120 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AL512593.1-201ENST00000444758 779 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AL022237.1-201ENST00000446663 358 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 YWHAEP1-201ENST00000453697 763 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 GEMIN2P1-201ENST00000454246 752 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC103563.5-201ENST00000455643 364 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC112187.1-201ENST00000455837 479 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 RN7SL269P-201ENST00000467795 305 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 DEFB109A-201ENST00000482450 265 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC008629.2-201ENST00000503783 483 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC010468.3-201ENST00000508225 458 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC005351.1-201ENST00000511152 786 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 GAPDHP71-201ENST00000511530 1003 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 KCTD9P4-201ENST00000526766 1166 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 CKS1BP1-201ENST00000555221 240 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC068620.3-201ENST00000602749 560 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AP000894.4-201ENST00000610185 483 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC093783.1-201ENST00000612976 329 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AP003476.1-201ENST00000623984 516 ntBASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CTDP1Q9Y5B0 AC245100.2-201ENST00000454544 1679 ntBASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CTDP1Q9Y5B0 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms