Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL512652.1-201ENST00000619006 500 ntBASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 AC026367.3-201ENST00000619032 590 ntBASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 AC015660.5-201ENST00000623238 564 ntBASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 AL359715.3-201ENST00000569267 2123 ntBASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KCNIP3Q9Y2W7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AL353625.1-202ENST00000366273 571 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 MIR138-2-201ENST00000384916 84 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 MIR130A-201ENST00000385274 89 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AL355994.1-201ENST00000424379 260 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 RPL7P56-201ENST00000429441 717 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 RPL34P6-201ENST00000432390 345 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AC016772.1-201ENST00000444170 1261 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 TAAR4P-201ENST00000454843 1039 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 RN7SL269P-201ENST00000467795 305 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 RN7SL790P-201ENST00000474043 298 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 RN7SKP253-201ENST00000516424 309 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 RNA5SP75-201ENST00000516841 111 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 MRPS21P8-201ENST00000569196 235 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 MIR3157-201ENST00000578688 85 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AC024267.2-201ENST00000582737 417 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 SMIM12P1-201ENST00000603004 274 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AL136131.3-201ENST00000607600 188 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AC073389.3-201ENST00000609434 935 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AC091932.2-201ENST00000623014 291 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 MTCO1P1-201ENST00000624263 1081 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 OR11H2-202ENST00000641517 1085 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 LINC01613-201ENST00000561476 2780 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AC022417.1-201ENST00000624768 1303 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 MTCO1P15-201ENST00000529569 1526 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 AL731566.1-201ENST00000620490 1937 ntBASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
KCNIP3Q9Y2W7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.65□□□□□ -1.66
KCNIP3Q9Y2W7 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KCNIP3Q9Y2W7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.65□□□□□ -1.66
KCNIP3Q9Y2W7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KCNIP3Q9Y2W7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
KCNIP3Q9Y2W7 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 NIFKP3-201ENST00000417799 865 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 VN1R20P-201ENST00000425215 966 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 RPL7AP49-201ENST00000429522 581 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms