Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 MTCO1P9-201ENST00000505577 1534 ntBASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
PDZRN3Q9UPQ7 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AC106872.5-201ENST00000508856 1416 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 MTCO1P23-201ENST00000415223 1526 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 RNU6-670P-201ENST00000364312 104 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 RNU6-738P-201ENST00000384531 106 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AC098592.1-201ENST00000419352 333 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 SDCBPP3-201ENST00000419629 891 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 MTCYBP24-201ENST00000420387 1106 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 MTND1P32-201ENST00000433043 938 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 MTND3P2-201ENST00000438452 342 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 RBMY3AP-201ENST00000449381 1145 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 SNRPGP9-201ENST00000456025 225 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 RPSAP7-201ENST00000456871 885 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AC006499.4-201ENST00000510947 694 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 Y_RNA.675-201ENST00000516389 149 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 RNU6-794P-201ENST00000517261 64 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 OR5AK1P-201ENST00000524837 922 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AC090515.3-201ENST00000560431 315 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AL391840.1-201ENST00000571144 367 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AC068802.1-201ENST00000603420 732 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AL049634.3-201ENST00000604968 457 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AL355480.1-201ENST00000629041 99 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 MIR3688-2-201ENST00000636963 87 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AC020978.6-201ENST00000571197 3177 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 PPBPP2-201ENST00000513150 1362 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 MED6-212ENST00000615788 1700 ntTSL 5 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 AC093225.1-201ENST00000506867 1408 ntBASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC8.97□□□□□ -0.97
PDZRN3Q9UPQ7 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
PDZRN3Q9UPQ7 MAPK10-383ENST00000642032 3390 ntBASIC8.96□□□□□ -0.97
PDZRN3Q9UPQ7 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
PDZRN3Q9UPQ7 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
PDZRN3Q9UPQ7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC8.96□□□□□ -0.97
PDZRN3Q9UPQ7 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC8.96□□□□□ -0.97
PDZRN3Q9UPQ7 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
PDZRN3Q9UPQ7 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
PDZRN3Q9UPQ7 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AL672167.1-206ENST00000356293 943 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 RNA5SP382-201ENST00000363355 112 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 RNA5SP152-201ENST00000365184 110 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 MIR199B-201ENST00000384849 110 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AL079341.1-201ENST00000404701 1207 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AL590084.1-201ENST00000407885 387 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 MTCO3P12-201ENST00000416718 547 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 YWHAZP7-201ENST00000436906 631 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 MTATP6P30-201ENST00000443540 664 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 PGBD4P1-201ENST00000473644 407 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 RNU6-123P-201ENST00000516163 102 ntBASIC8.96□□□□□ -0.98
PDZRN3Q9UPQ7 IGLC4-201ENST00000517690 248 ntBASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms