Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 POU5F1P7-201ENST00000508759 541 ntBASIC8□□□□□ -1.13
LIMD1Q9UGP4 FGF7P4-201ENST00000509595 295 ntBASIC8□□□□□ -1.13
LIMD1Q9UGP4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC8□□□□□ -1.13
LIMD1Q9UGP4 HMGB1P23-201ENST00000518743 568 ntBASIC8□□□□□ -1.13
LIMD1Q9UGP4 AC008429.4-201ENST00000521201 182 ntBASIC8□□□□□ -1.13
LIMD1Q9UGP4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC8□□□□□ -1.13
LIMD1Q9UGP4 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC8□□□□□ -1.13
LIMD1Q9UGP4 OR7E87P-201ENST00000532397 929 ntBASIC8□□□□□ -1.13
LIMD1Q9UGP4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC8□□□□□ -1.13
LIMD1Q9UGP4 AC068631.3-201ENST00000538831 225 ntBASIC8□□□□□ -1.13
LIMD1Q9UGP4 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC8□□□□□ -1.13
LIMD1Q9UGP4 AL109628.1-201ENST00000556877 366 ntBASIC8□□□□□ -1.13
LIMD1Q9UGP4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC8□□□□□ -1.13
LIMD1Q9UGP4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC8□□□□□ -1.13
LIMD1Q9UGP4 RN7SL473P-201ENST00000580341 299 ntBASIC8□□□□□ -1.13
LIMD1Q9UGP4 AC010928.3-201ENST00000587712 541 ntBASIC8□□□□□ -1.13
LIMD1Q9UGP4 AC022432.1-201ENST00000595739 310 ntBASIC8□□□□□ -1.13
LIMD1Q9UGP4 BNIP3P23-201ENST00000599655 511 ntBASIC8□□□□□ -1.13
LIMD1Q9UGP4 AC135507.2-201ENST00000612443 309 ntBASIC8□□□□□ -1.13
LIMD1Q9UGP4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC8□□□□□ -1.13
LIMD1Q9UGP4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
LIMD1Q9UGP4 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
LIMD1Q9UGP4 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
LIMD1Q9UGP4 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
LIMD1Q9UGP4 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
LIMD1Q9UGP4 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
LIMD1Q9UGP4 AC018880.1-201ENST00000418898 1319 ntBASIC8□□□□□ -1.13
LIMD1Q9UGP4 GDI2P1-201ENST00000429312 1336 ntBASIC8□□□□□ -1.13
LIMD1Q9UGP4 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
LIMD1Q9UGP4 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC8□□□□□ -1.13
LIMD1Q9UGP4 Z93929.1-201ENST00000418200 1475 ntBASIC8□□□□□ -1.13
LIMD1Q9UGP4 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC8□□□□□ -1.13
LIMD1Q9UGP4 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC8□□□□□ -1.13
LIMD1Q9UGP4 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC8□□□□□ -1.13
LIMD1Q9UGP4 RN7SKP23-201ENST00000625159 4301 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC245100.2-201ENST00000454544 1679 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 OR10D1P-201ENST00000355343 936 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 MIR506-201ENST00000384998 124 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 SNRPEP2-201ENST00000397592 279 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AL034417.1-201ENST00000399343 800 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AL049693.1-201ENST00000402760 611 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AL034374.1-201ENST00000406329 351 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 MIR1272-201ENST00000408106 129 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 BX295541.1-201ENST00000417774 250 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC231533.2-201ENST00000419045 978 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 USP9YP9-201ENST00000429406 715 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC009961.2-201ENST00000435771 251 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AL356133.1-201ENST00000444762 372 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 KYNUP1-201ENST00000466683 1406 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 RN7SL37P-201ENST00000490461 307 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC106822.1-201ENST00000502647 526 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC087257.2-201ENST00000538759 928 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 RPL21P5-201ENST00000554662 472 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC093519.1-201ENST00000566109 298 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 MIR4795-201ENST00000584182 89 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC020910.2-201ENST00000603635 610 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC005070.2-201ENST00000604391 260 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC004852.1-201ENST00000605206 154 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AC018695.5-201ENST00000605872 315 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 AL445222.1-201ENST00000607259 628 ntBASIC7.99□□□□□ -1.13
LIMD1Q9UGP4 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms