Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 IPPKP1-201ENST00000422501 768 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 ETF1P3-201ENST00000430422 1160 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 ATP5LP2-201ENST00000440646 311 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 PPIAP27-201ENST00000453800 265 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 RANP2-201ENST00000456833 229 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 SNX18P26-201ENST00000458433 740 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC023194.2-201ENST00000465398 406 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 ASNSP4-201ENST00000511103 447 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 IGKV3D-34-201ENST00000522638 302 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 IGHV1-14-201ENST00000523391 241 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 HMGB1P42-201ENST00000532126 553 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC087894.1-201ENST00000538359 518 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 AP003717.3-201ENST00000544832 1180 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC090666.1-201ENST00000578241 445 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC008507.2-201ENST00000588402 1176 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC090330.1-201ENST00000588646 764 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC067852.5-201ENST00000589299 310 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC067773.1-201ENST00000603284 1094 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 AL138960.1-201ENST00000613838 513 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC026124.2-201ENST00000621847 656 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 AL445984.1-201ENST00000637834 659 ntBASIC5.73□□□□□ -1.49
LRFN1Q9P244 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.73□□□□□ -1.49
LRFN1Q9P244 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRFN1Q9P244 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRFN1Q9P244 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRFN1Q9P244 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRFN1Q9P244 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRFN1Q9P244 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRFN1Q9P244 AC093311.1-201ENST00000506586 2021 ntBASIC5.72□□□□□ -1.49
LRFN1Q9P244 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRFN1Q9P244 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRFN1Q9P244 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRFN1Q9P244 LCN1P2-201ENST00000372030 223 ntBASIC5.72□□□□□ -1.49
LRFN1Q9P244 MIR142-201ENST00000384835 87 ntBASIC5.72□□□□□ -1.49
LRFN1Q9P244 UBE2V1P9-201ENST00000414760 368 ntBASIC5.72□□□□□ -1.49
LRFN1Q9P244 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 MTND2P2-201ENST00000434633 945 ntBASIC5.72□□□□□ -1.49
LRFN1Q9P244 AL353662.1-201ENST00000439099 327 ntBASIC5.72□□□□□ -1.49
LRFN1Q9P244 AL355355.1-201ENST00000442900 793 ntBASIC5.72□□□□□ -1.49
LRFN1Q9P244 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRFN1Q9P244 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 Y_RNA.710-201ENST00000516975 110 ntBASIC5.72□□□□□ -1.49
LRFN1Q9P244 IGKV3D-25-201ENST00000519599 235 ntBASIC5.72□□□□□ -1.49
LRFN1Q9P244 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRFN1Q9P244 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 AC012254.4-201ENST00000588843 273 ntBASIC5.72□□□□□ -1.49
LRFN1Q9P244 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.72□□□□□ -1.49
LRFN1Q9P244 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 AP000894.4-201ENST00000610185 483 ntBASIC5.72□□□□□ -1.49
LRFN1Q9P244 AC006924.1-201ENST00000610750 559 ntBASIC5.72□□□□□ -1.49
LRFN1Q9P244 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.72□□□□□ -1.49
LRFN1Q9P244 AC022106.1-201ENST00000612834 766 ntBASIC5.72□□□□□ -1.49
LRFN1Q9P244 AL512652.1-201ENST00000619006 500 ntBASIC5.72□□□□□ -1.49
LRFN1Q9P244 U1.31-201ENST00000620022 160 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms