Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RPS3AP38-201ENST00000435889 763 ntBASIC6.49□□□□□ -1.37
COL20A1Q9P218 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.49□□□□□ -1.37
COL20A1Q9P218 AC019185.1-201ENST00000442718 389 ntBASIC6.49□□□□□ -1.37
COL20A1Q9P218 AC108751.3-201ENST00000461814 1020 ntBASIC6.49□□□□□ -1.37
COL20A1Q9P218 RPL23AP73-201ENST00000492507 471 ntBASIC6.49□□□□□ -1.37
COL20A1Q9P218 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.49□□□□□ -1.37
COL20A1Q9P218 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL20A1Q9P218 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.49□□□□□ -1.37
COL20A1Q9P218 AC074255.1-201ENST00000511259 501 ntBASIC6.49□□□□□ -1.37
COL20A1Q9P218 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.49□□□□□ -1.37
COL20A1Q9P218 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.49□□□□□ -1.37
COL20A1Q9P218 AC125612.1-201ENST00000547580 377 ntBASIC6.49□□□□□ -1.37
COL20A1Q9P218 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL20A1Q9P218 AC106785.3-201ENST00000564064 847 ntBASIC6.49□□□□□ -1.37
COL20A1Q9P218 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.49□□□□□ -1.37
COL20A1Q9P218 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.49□□□□□ -1.37
COL20A1Q9P218 CR589904.2-201ENST00000612533 440 ntBASIC6.49□□□□□ -1.37
COL20A1Q9P218 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.49□□□□□ -1.37
COL20A1Q9P218 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.49□□□□□ -1.37
COL20A1Q9P218 AC069234.4-201ENST00000621276 412 ntBASIC6.49□□□□□ -1.37
COL20A1Q9P218 MAPK10-350ENST00000641777 965 ntBASIC6.49□□□□□ -1.37
COL20A1Q9P218 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL20A1Q9P218 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL20A1Q9P218 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL20A1Q9P218 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL20A1Q9P218 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL20A1Q9P218 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL20A1Q9P218 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL20A1Q9P218 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL20A1Q9P218 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL20A1Q9P218 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL20A1Q9P218 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL20A1Q9P218 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL20A1Q9P218 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL20A1Q9P218 SNORA63.3-201ENST00000362682 132 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL20A1Q9P218 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 RPS26P4-201ENST00000431743 355 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 AC006335.2-201ENST00000437993 330 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 ELOCP3-201ENST00000439303 348 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 XKRY2-201ENST00000442362 1093 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 RNU1-88P-201ENST00000459274 128 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 RN7SL629P-201ENST00000489622 285 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL20A1Q9P218 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 AC016550.3-201ENST00000515706 767 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 SNORA76.2-201ENST00000517095 137 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 IGLV3-24-201ENST00000517477 197 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 AC104072.1-201ENST00000568817 668 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 AC007448.1-201ENST00000582714 234 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 QTRT1P1-201ENST00000604344 1078 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL20A1Q9P218 AL163051.2-201ENST00000618976 735 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 AC017002.4-201ENST00000604721 1525 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 AP000547.3-204ENST00000588548 2523 ntBASIC6.48□□□□□ -1.37
COL20A1Q9P218 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL20A1Q9P218 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL20A1Q9P218 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.48□□□□□ -1.37
COL20A1Q9P218 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL20A1Q9P218 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.47□□□□□ -1.37
COL20A1Q9P218 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL20A1Q9P218 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL20A1Q9P218 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL20A1Q9P218 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.47□□□□□ -1.37
COL20A1Q9P218 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.47□□□□□ -1.37
COL20A1Q9P218 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL20A1Q9P218 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL20A1Q9P218 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL20A1Q9P218 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL20A1Q9P218 RN7SKP278-201ENST00000410504 342 ntBASIC6.47□□□□□ -1.37
COL20A1Q9P218 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL20A1Q9P218 RPS6P23-201ENST00000413224 722 ntBASIC6.47□□□□□ -1.37
COL20A1Q9P218 RPS21P8-201ENST00000413365 247 ntBASIC6.47□□□□□ -1.37
COL20A1Q9P218 USP24P1-201ENST00000433802 779 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms