Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 OR11H3P-201ENST00000554547 982 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AC121758.1-202ENST00000556917 658 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AP005403.1-201ENST00000579720 229 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AC011500.1-201ENST00000601963 469 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AC009027.1-201ENST00000604510 479 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AC091167.5-201ENST00000605689 894 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AC135068.5-201ENST00000624197 983 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 AC099654.6-201ENST00000636487 512 ntBASIC6.61□□□□□ -1.35
UPF2Q9HAU5 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.61□□□□□ -1.35
UPF2Q9HAU5 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 AC004817.4-201ENST00000602396 3625 ntBASIC6.6□□□□□ -1.35
UPF2Q9HAU5 AL603750.1-201ENST00000624216 1717 ntBASIC6.6□□□□□ -1.35
UPF2Q9HAU5 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 COX6B1P3-201ENST00000312310 260 ntBASIC6.6□□□□□ -1.35
UPF2Q9HAU5 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 HMGB3P24-201ENST00000433260 622 ntBASIC6.6□□□□□ -1.35
UPF2Q9HAU5 RPL12P18-201ENST00000437175 325 ntBASIC6.6□□□□□ -1.35
UPF2Q9HAU5 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 AC073476.1-201ENST00000452854 407 ntBASIC6.6□□□□□ -1.35
UPF2Q9HAU5 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 HMGB1P42-201ENST00000532126 553 ntBASIC6.6□□□□□ -1.35
UPF2Q9HAU5 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 AC005828.7-201ENST00000607331 556 ntBASIC6.6□□□□□ -1.35
UPF2Q9HAU5 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 MIR6813-201ENST00000621638 56 ntBASIC6.6□□□□□ -1.35
UPF2Q9HAU5 AC006600.2-201ENST00000624834 2506 ntBASIC6.6□□□□□ -1.35
UPF2Q9HAU5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 SMG1P7-201ENST00000565246 2704 ntBASIC6.6□□□□□ -1.35
UPF2Q9HAU5 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
UPF2Q9HAU5 HSPA8P14-201ENST00000552265 1805 ntBASIC6.6□□□□□ -1.35
UPF2Q9HAU5 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 RN7SKP86-201ENST00000410454 332 ntBASIC6.59□□□□□ -1.35
UPF2Q9HAU5 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 AC124944.2-201ENST00000429866 1242 ntBASIC6.59□□□□□ -1.35
UPF2Q9HAU5 RPL12P17-201ENST00000432393 498 ntBASIC6.59□□□□□ -1.35
UPF2Q9HAU5 NDUFS5P5-201ENST00000437256 321 ntBASIC6.59□□□□□ -1.35
UPF2Q9HAU5 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 AC098818.1-201ENST00000478593 252 ntBASIC6.59□□□□□ -1.35
UPF2Q9HAU5 AC093827.1-201ENST00000480094 861 ntBASIC6.59□□□□□ -1.35
UPF2Q9HAU5 AC044810.1-201ENST00000480271 711 ntBASIC6.59□□□□□ -1.35
UPF2Q9HAU5 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 RN7SL568P-201ENST00000493069 298 ntBASIC6.59□□□□□ -1.35
UPF2Q9HAU5 BLNK-209ENST00000495266 440 ntTSL 5 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 RBBP4P1-201ENST00000502424 1276 ntBASIC6.59□□□□□ -1.35
UPF2Q9HAU5 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 ARGFXP2-201ENST00000579304 949 ntBASIC6.59□□□□□ -1.35
UPF2Q9HAU5 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 AP000769.2-201ENST00000602344 396 ntBASIC6.59□□□□□ -1.35
UPF2Q9HAU5 AP005431.1-201ENST00000618479 319 ntBASIC6.59□□□□□ -1.35
UPF2Q9HAU5 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
UPF2Q9HAU5 AC104966.1-201ENST00000467010 1464 ntBASIC6.59□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms