Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 AC100757.1-201ENST00000616872 1835 ntBASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 RNU1-59P-201ENST00000364829 162 ntBASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 U3.28-201ENST00000391249 210 ntBASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 SNORA48.7-201ENST00000391302 135 ntBASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 AC004690.1-201ENST00000418216 328 ntBASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 AC044797.1-201ENST00000445744 679 ntBASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 SNORD125-201ENST00000459538 96 ntBASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 SCARNA20.4-201ENST00000516969 131 ntBASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 BNIP3P5-201ENST00000562290 498 ntBASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 MIR4675-201ENST00000577898 77 ntBASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 U1.25-201ENST00000614085 162 ntBASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 U1.34-201ENST00000618578 162 ntBASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 U1.31-201ENST00000620022 160 ntBASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 ASNSP1-204ENST00000641977 1664 ntBASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 AC132825.1-201ENST00000463573 2247 ntBASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 LRRC37A9P-201ENST00000603850 5376 ntBASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SHANK3Q9BYB0 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 AC006058.1-201ENST00000568686 5067 ntBASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 RNA5SP388-201ENST00000362584 119 ntBASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 RNA5SP43-201ENST00000516559 110 ntBASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 GCSHP4-201ENST00000538792 439 ntBASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 MIR4737-201ENST00000583979 81 ntBASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 AC244107.2-201ENST00000611773 76 ntBASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 AC119751.6-201ENST00000416712 186 ntBASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 LINC02210-201ENST00000444561 288 ntBASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 REG1CP-206ENST00000447469 496 ntBASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 RPS4XP20-201ENST00000505751 772 ntBASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 UBE2FP2-201ENST00000566646 462 ntBASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 AC005377.1-201ENST00000605126 456 ntBASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SHANK3Q9BYB0 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 AC104162.1-201ENST00000430831 2382 ntBASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 GAPDHP15-201ENST00000398586 975 ntBASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 RPS26P38-201ENST00000414476 348 ntBASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.86□□□□□ -1.31
SHANK3Q9BYB0 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms