Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC018692.2-201ENST00000624130 348 ntBASIC7.46□□□□□ -1.22
SYNGAP1Q96PV0 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.46□□□□□ -1.22
SYNGAP1Q96PV0 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SYNGAP1Q96PV0 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SYNGAP1Q96PV0 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SYNGAP1Q96PV0 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SYNGAP1Q96PV0 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.22
SYNGAP1Q96PV0 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.46□□□□□ -1.22
SYNGAP1Q96PV0 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 MAPK10-344ENST00000641718 3746 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 SNORD113-6-201ENST00000363345 75 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 RNU5A-2P-201ENST00000384337 116 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 RNU6-1215P-201ENST00000384441 102 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 RPL5P20-201ENST00000403848 896 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AL139805.1-201ENST00000407837 289 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 MOB4-205ENST00000409916 829 ntTSL 3 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 RN7SKP216-201ENST00000411050 312 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 SCP2-206ENST00000430330 938 ntTSL 2 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 NANOGP2-201ENST00000435391 727 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 GAPDHP48-201ENST00000436626 961 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 FABP5P2-201ENST00000439042 408 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 RPL6P30-201ENST00000443382 862 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 TAF9P1-201ENST00000445421 515 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 HMGB1P7-201ENST00000450921 612 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 TAF9P2-201ENST00000454958 515 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AC084754.1-201ENST00000463466 464 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AC068724.1-201ENST00000487100 792 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 GM2AP2-201ENST00000491764 562 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 NAA50-206ENST00000493454 964 ntTSL 2 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AC133963.2-201ENST00000513686 578 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 ZNF519P4-201ENST00000514008 125 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 PCNPP1-201ENST00000552501 511 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AL162632.2-201ENST00000553933 399 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AL133241.1-201ENST00000556832 487 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 RN7SL208P-201ENST00000577964 296 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AC011451.2-201ENST00000604303 598 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AP003973.1-201ENST00000604639 691 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AC005377.1-201ENST00000605126 456 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AL513477.2-201ENST00000607858 568 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AC122133.1-201ENST00000613964 233 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AC092656.1-203ENST00000624134 423 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AC092104.1-201ENST00000497346 1441 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 AC073429.2-201ENST00000569694 1444 ntBASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.45□□□□□ -1.22
SYNGAP1Q96PV0 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC104966.1-201ENST00000467010 1464 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 ANKRD36BP1-202ENST00000604892 1417 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 AC123769.1-201ENST00000530992 3192 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 LCN1P2-201ENST00000372030 223 ntBASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SYNGAP1Q96PV0 MTND4LP21-201ENST00000415303 295 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms