Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.23□□□□□ -1.57
COL21A1Q96P44 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.23□□□□□ -1.57
COL21A1Q96P44 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.23□□□□□ -1.57
COL21A1Q96P44 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.23□□□□□ -1.57
COL21A1Q96P44 RN7SL753P-201ENST00000581238 290 ntBASIC5.23□□□□□ -1.57
COL21A1Q96P44 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.23□□□□□ -1.57
COL21A1Q96P44 AL139124.1-201ENST00000609123 421 ntBASIC5.23□□□□□ -1.57
COL21A1Q96P44 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.23□□□□□ -1.57
COL21A1Q96P44 AC010632.3-201ENST00000611377 369 ntBASIC5.23□□□□□ -1.57
COL21A1Q96P44 AC008833.1-201ENST00000611633 691 ntBASIC5.23□□□□□ -1.57
COL21A1Q96P44 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.23□□□□□ -1.57
COL21A1Q96P44 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.23□□□□□ -1.57
COL21A1Q96P44 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.23□□□□□ -1.57
COL21A1Q96P44 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.23□□□□□ -1.57
COL21A1Q96P44 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.23□□□□□ -1.57
COL21A1Q96P44 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL21A1Q96P44 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.23□□□□□ -1.57
COL21A1Q96P44 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COL21A1Q96P44 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL21A1Q96P44 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL21A1Q96P44 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.23□□□□□ -1.57
COL21A1Q96P44 AC007842.1-201ENST00000597336 2039 ntBASIC5.23□□□□□ -1.57
COL21A1Q96P44 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL21A1Q96P44 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COL21A1Q96P44 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 AC083899.1-201ENST00000454465 3819 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL21A1Q96P44 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL21A1Q96P44 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL21A1Q96P44 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL21A1Q96P44 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL21A1Q96P44 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL21A1Q96P44 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 AL031985.1-201ENST00000392713 418 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 SDHDP6-201ENST00000414693 480 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 HYALP1-201ENST00000417674 1279 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 NENFP1-201ENST00000419476 466 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 AC113412.1-201ENST00000425840 504 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 AL389925.1-201ENST00000432257 728 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 AC092106.1-201ENST00000444291 373 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 AC005297.1-201ENST00000444765 862 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 RPL36AP39-201ENST00000445859 318 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL21A1Q96P44 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL21A1Q96P44 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 DUTP7-201ENST00000507982 486 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 UGT2A3P7-201ENST00000510485 734 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 SNORA43.3-201ENST00000517240 103 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 IGLV3-24-201ENST00000517477 197 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 AC112191.2-201ENST00000522428 333 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 AC009852.2-201ENST00000567898 485 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 MIR7853-201ENST00000584820 132 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 AC127024.6-201ENST00000621598 424 ntBASIC5.22□□□□□ -1.57
COL21A1Q96P44 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL21A1Q96P44 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL21A1Q96P44 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL21A1Q96P44 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL21A1Q96P44 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL21A1Q96P44 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
COL21A1Q96P44 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.21□□□□□ -1.57
COL21A1Q96P44 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
COL21A1Q96P44 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
COL21A1Q96P44 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
COL21A1Q96P44 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL21A1Q96P44 MRE11P1-201ENST00000464884 2127 ntBASIC5.21□□□□□ -1.57
COL21A1Q96P44 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.21□□□□□ -1.57
COL21A1Q96P44 RNF19BPY-201ENST00000458209 1550 ntBASIC5.21□□□□□ -1.57
COL21A1Q96P44 AC079097.1-201ENST00000512187 1399 ntBASIC5.21□□□□□ -1.58
COL21A1Q96P44 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL21A1Q96P44 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 RNA5SP46-201ENST00000362370 120 ntBASIC5.21□□□□□ -1.58
COL21A1Q96P44 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 AL662874.1-201ENST00000426065 230 ntBASIC5.21□□□□□ -1.58
COL21A1Q96P44 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.21□□□□□ -1.58
COL21A1Q96P44 AC064862.4-201ENST00000442180 334 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms