Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RN7SKP229-201ENST00000410465 302 ntBASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 NPM1P4-201ENST00000414095 812 ntBASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 SRSF1P1-201ENST00000424058 520 ntBASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 AL672138.1-201ENST00000450604 1015 ntBASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 RPS26P39-201ENST00000469206 341 ntBASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 EIF3LP3-201ENST00000495197 822 ntBASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 RN7SL284P-201ENST00000498823 275 ntBASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 HMGB1P44-201ENST00000508597 572 ntBASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 MTND6P2-201ENST00000512226 524 ntBASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 AC126177.5-201ENST00000549599 178 ntBASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 AP000864.1-201ENST00000609424 650 ntBASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 AC005840.5-201ENST00000619166 599 ntBASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 AC005618.4-201ENST00000625053 554 ntBASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.5□□□□□ -1.53
ECHDC3Q96DC8 CIR1P2-201ENST00000514821 1342 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC144833.1-201ENST00000567953 4089 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 ICE2P1-201ENST00000512800 1849 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 RNU11-201ENST00000387069 134 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 RPL12P17-201ENST00000432393 498 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 CFL1P1-202ENST00000432948 411 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC013410.1-201ENST00000436223 1232 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC091912.1-201ENST00000511351 248 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 BX510359.5-201ENST00000515651 304 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 RNU6-1334P-201ENST00000516032 105 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 RN7SKP99-201ENST00000517028 307 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC021733.2-201ENST00000518830 497 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC136777.2-201ENST00000522979 358 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 OR4A17P-201ENST00000526032 904 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AP001284.1-201ENST00000528393 2118 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AP005403.1-201ENST00000579720 229 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AL360012.1-201ENST00000602813 131 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 NLRP3P1-201ENST00000622303 1785 ntBASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ECHDC3Q96DC8 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
ECHDC3Q96DC8 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms