Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CARSP2-201ENST00000520688 277 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AC140063.1-201ENST00000541343 259 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AC006530.1-201ENST00000555980 571 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AC245505.1-201ENST00000556398 224 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AC083760.1-201ENST00000589621 670 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 RPS27AP19-201ENST00000597285 458 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AL606834.2-201ENST00000602954 668 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 U73023.1-201ENST00000603134 700 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AL353621.2-201ENST00000605340 133 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AC010678.1-201ENST00000614118 713 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 MRPL57P3-201ENST00000619218 176 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AC008443.7-201ENST00000622195 246 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AC106782.7-201ENST00000624024 418 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AP000577.1-201ENST00000624366 878 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AC133555.5-201ENST00000624430 418 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 NCOA4P2-201ENST00000340589 1813 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 UGT2B27P-201ENST00000505092 1620 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 ZNF806-201ENST00000438300 1774 ntBASIC6.31□□□□□ -1.4
NUP43Q8NFH3 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUP43Q8NFH3 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 API5P1-201ENST00000424316 1510 ntBASIC6.3□□□□□ -1.4
NUP43Q8NFH3 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 Y_RNA.88-201ENST00000363029 99 ntBASIC6.3□□□□□ -1.4
NUP43Q8NFH3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 RNA5SP474-201ENST00000391234 90 ntBASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 EIF1P1-201ENST00000421436 341 ntBASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AL139421.1-201ENST00000423010 169 ntBASIC6.3□□□□□ -1.4
NUP43Q8NFH3 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AC009784.1-201ENST00000426484 460 ntBASIC6.3□□□□□ -1.4
NUP43Q8NFH3 MTCO2P19-201ENST00000427513 598 ntBASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AL139415.2-201ENST00000431968 163 ntBASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 USP9YP35-201ENST00000435696 412 ntBASIC6.3□□□□□ -1.4
NUP43Q8NFH3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AL592114.2-201ENST00000440142 532 ntBASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AC107398.1-201ENST00000486904 505 ntBASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AC021006.1-201ENST00000489849 553 ntBASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AC116353.2-201ENST00000505332 712 ntBASIC6.3□□□□□ -1.4
NUP43Q8NFH3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AC096754.1-201ENST00000508904 818 ntBASIC6.3□□□□□ -1.4
NUP43Q8NFH3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AC087883.1-201ENST00000551882 391 ntBASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.3□□□□□ -1.4
NUP43Q8NFH3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms