Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.65□□□□□ -1.34
CTR9Q6PD62 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
CTR9Q6PD62 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.65□□□□□ -1.35
CTR9Q6PD62 CIR1P2-201ENST00000514821 1342 ntBASIC6.65□□□□□ -1.35
CTR9Q6PD62 CASC19-248ENST00000641674 1356 ntBASIC6.65□□□□□ -1.35
CTR9Q6PD62 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CTR9Q6PD62 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CTR9Q6PD62 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CTR9Q6PD62 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.65□□□□□ -1.35
CTR9Q6PD62 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
CTR9Q6PD62 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
CTR9Q6PD62 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
CTR9Q6PD62 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CTR9Q6PD62 AL034546.1-201ENST00000623740 3693 ntBASIC6.64□□□□□ -1.35
CTR9Q6PD62 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.64□□□□□ -1.35
CTR9Q6PD62 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.64□□□□□ -1.35
CTR9Q6PD62 AC005042.1-201ENST00000393397 800 ntBASIC6.64□□□□□ -1.35
CTR9Q6PD62 AC005522.1-201ENST00000395416 346 ntBASIC6.64□□□□□ -1.35
CTR9Q6PD62 EI24P3-201ENST00000399046 1062 ntBASIC6.64□□□□□ -1.35
CTR9Q6PD62 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.64□□□□□ -1.35
CTR9Q6PD62 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.64□□□□□ -1.35
CTR9Q6PD62 RNGTTP1-201ENST00000420965 728 ntBASIC6.64□□□□□ -1.35
CTR9Q6PD62 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CTR9Q6PD62 AC242426.1-201ENST00000435270 960 ntBASIC6.64□□□□□ -1.35
CTR9Q6PD62 RPL5P25-201ENST00000441148 775 ntBASIC6.64□□□□□ -1.35
CTR9Q6PD62 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.64□□□□□ -1.35
CTR9Q6PD62 SIAH1P1-201ENST00000479411 923 ntBASIC6.64□□□□□ -1.35
CTR9Q6PD62 RN7SKP253-201ENST00000516424 309 ntBASIC6.64□□□□□ -1.35
CTR9Q6PD62 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.64□□□□□ -1.35
CTR9Q6PD62 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CTR9Q6PD62 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CTR9Q6PD62 AC012616.1-201ENST00000600294 197 ntBASIC6.64□□□□□ -1.35
CTR9Q6PD62 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.64□□□□□ -1.35
CTR9Q6PD62 AL118522.2-201ENST00000616045 615 ntBASIC6.64□□□□□ -1.35
CTR9Q6PD62 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.64□□□□□ -1.35
CTR9Q6PD62 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
CTR9Q6PD62 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CTR9Q6PD62 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.64□□□□□ -1.35
CTR9Q6PD62 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.64□□□□□ -1.35
CTR9Q6PD62 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CTR9Q6PD62 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.64□□□□□ -1.35
CTR9Q6PD62 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CTR9Q6PD62 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CTR9Q6PD62 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CTR9Q6PD62 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CTR9Q6PD62 AC068870.1-201ENST00000563737 2455 ntBASIC6.64□□□□□ -1.35
CTR9Q6PD62 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CTR9Q6PD62 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTR9Q6PD62 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTR9Q6PD62 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CTR9Q6PD62 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTR9Q6PD62 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTR9Q6PD62 RNU4-2-201ENST00000365668 141 ntBASIC6.63□□□□□ -1.35
CTR9Q6PD62 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTR9Q6PD62 RPL11P3-201ENST00000395256 523 ntBASIC6.63□□□□□ -1.35
CTR9Q6PD62 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTR9Q6PD62 AL009179.1-201ENST00000406085 265 ntBASIC6.63□□□□□ -1.35
CTR9Q6PD62 RPS27AP6-201ENST00000427962 448 ntBASIC6.63□□□□□ -1.35
CTR9Q6PD62 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.63□□□□□ -1.35
CTR9Q6PD62 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.63□□□□□ -1.35
CTR9Q6PD62 AC100832.1-201ENST00000471945 383 ntBASIC6.63□□□□□ -1.35
CTR9Q6PD62 AC090638.1-201ENST00000498296 909 ntBASIC6.63□□□□□ -1.35
CTR9Q6PD62 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CTR9Q6PD62 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.63□□□□□ -1.35
CTR9Q6PD62 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.63□□□□□ -1.35
CTR9Q6PD62 AC007225.2-201ENST00000562529 256 ntBASIC6.63□□□□□ -1.35
CTR9Q6PD62 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTR9Q6PD62 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.63□□□□□ -1.35
CTR9Q6PD62 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
CTR9Q6PD62 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.63□□□□□ -1.35
CTR9Q6PD62 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTR9Q6PD62 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.63□□□□□ -1.35
CTR9Q6PD62 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
CTR9Q6PD62 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CTR9Q6PD62 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CTR9Q6PD62 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CTR9Q6PD62 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.62□□□□□ -1.35
CTR9Q6PD62 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.62□□□□□ -1.35
CTR9Q6PD62 NPM1P4-201ENST00000414095 812 ntBASIC6.62□□□□□ -1.35
CTR9Q6PD62 AC007161.1-204ENST00000423039 460 ntBASIC6.62□□□□□ -1.35
CTR9Q6PD62 CFL1P1-202ENST00000432948 411 ntBASIC6.62□□□□□ -1.35
CTR9Q6PD62 NANOGP9-201ENST00000439890 892 ntBASIC6.62□□□□□ -1.35
CTR9Q6PD62 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.62□□□□□ -1.35
CTR9Q6PD62 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.62□□□□□ -1.35
CTR9Q6PD62 AC007386.1-201ENST00000455212 582 ntBASIC6.62□□□□□ -1.35
CTR9Q6PD62 EIF1P7-201ENST00000487533 337 ntBASIC6.62□□□□□ -1.35
CTR9Q6PD62 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
CTR9Q6PD62 SCARNA21.2-201ENST00000516600 166 ntBASIC6.62□□□□□ -1.35
CTR9Q6PD62 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.62□□□□□ -1.35
CTR9Q6PD62 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.62□□□□□ -1.35
CTR9Q6PD62 AC090022.1-201ENST00000546569 311 ntBASIC6.62□□□□□ -1.35
CTR9Q6PD62 SUGT1P3-202ENST00000604259 383 ntBASIC6.62□□□□□ -1.35
CTR9Q6PD62 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.62□□□□□ -1.35
CTR9Q6PD62 MIR8080-201ENST00000622224 89 ntBASIC6.62□□□□□ -1.35
CTR9Q6PD62 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CTR9Q6PD62 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CTR9Q6PD62 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.61□□□□□ -1.35
CTR9Q6PD62 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CTR9Q6PD62 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CTR9Q6PD62 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms