Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RIF1Q5UIP0 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 Z98755.1-201ENST00000407015 1384 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 RN7SKP145-201ENST00000363291 303 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 RNU1-146P-201ENST00000364015 165 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 RNA5SP332-201ENST00000391063 115 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 RPL10P10-201ENST00000403509 664 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 AL445189.1-201ENST00000405722 338 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 AC025674.1-201ENST00000507074 324 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 IGKV2-23-201ENST00000518729 323 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 AC125494.2-201ENST00000602431 657 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 CASC19-205ENST00000641013 1411 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 AL672138.1-201ENST00000450604 1015 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 AC111000.3-201ENST00000508057 576 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 AC105384.2-201ENST00000508433 640 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 AC026688.1-201ENST00000520639 1168 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 MIR4737-201ENST00000583979 81 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 AC012254.5-201ENST00000623573 478 ntBASIC5.31□□□□□ -1.56
RIF1Q5UIP0 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RIF1Q5UIP0 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.3□□□□□ -1.56
RIF1Q5UIP0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 MIR208A-201ENST00000362287 71 ntBASIC5.3□□□□□ -1.56
RIF1Q5UIP0 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 OR4K12P-201ENST00000406538 961 ntBASIC5.3□□□□□ -1.56
RIF1Q5UIP0 AL365220.1-201ENST00000432923 399 ntBASIC5.3□□□□□ -1.56
RIF1Q5UIP0 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.3□□□□□ -1.56
RIF1Q5UIP0 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 PWAR1-201ENST00000624188 2414 ntBASIC5.3□□□□□ -1.56
RIF1Q5UIP0 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 AOX3P-204ENST00000491025 2107 ntBASIC5.3□□□□□ -1.56
RIF1Q5UIP0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 MORF4L1P5-201ENST00000433352 961 ntBASIC5.3□□□□□ -1.56
RIF1Q5UIP0 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 SNORA84-201ENST00000459229 133 ntBASIC5.3□□□□□ -1.56
RIF1Q5UIP0 RPS23P2-201ENST00000463671 415 ntBASIC5.3□□□□□ -1.56
RIF1Q5UIP0 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 AC007494.1-201ENST00000562293 760 ntBASIC5.3□□□□□ -1.56
RIF1Q5UIP0 AL512782.1-201ENST00000603093 364 ntBASIC5.3□□□□□ -1.56
RIF1Q5UIP0 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RIF1Q5UIP0 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RIF1Q5UIP0 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms