Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC38Q502W7 RFPL4AP6-201ENST00000616792 846 ntBASIC6.15□□□□□ -1.42
CCDC38Q502W7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC38Q502W7 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC38Q502W7 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
CCDC38Q502W7 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC38Q502W7 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.15□□□□□ -1.43
CCDC38Q502W7 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.15□□□□□ -1.43
CCDC38Q502W7 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC38Q502W7 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC38Q502W7 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
CCDC38Q502W7 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC38Q502W7 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC38Q502W7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC38Q502W7 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
CCDC38Q502W7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC38Q502W7 MAPK10-338ENST00000641647 3362 ntBASIC6.15□□□□□ -1.43
CCDC38Q502W7 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.15□□□□□ -1.43
CCDC38Q502W7 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC38Q502W7 ZNF90P1-201ENST00000480493 1951 ntBASIC6.15□□□□□ -1.43
CCDC38Q502W7 AC239868.2-201ENST00000564237 4527 ntBASIC6.15□□□□□ -1.43
CCDC38Q502W7 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC38Q502W7 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC38Q502W7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC38Q502W7 THAP12P9-201ENST00000503971 2360 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 RNA5SP110-201ENST00000362638 115 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 RN7SKP128-201ENST00000364270 303 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 MIR188-201ENST00000385034 86 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 AC099535.1-201ENST00000408928 371 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 RN7SKP108-201ENST00000411367 328 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 MYL6P5-201ENST00000412707 459 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 GTF3AP1-201ENST00000416942 1004 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 RPS15AP30-201ENST00000420976 390 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 OR3D1P-201ENST00000438288 955 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 AC023512.1-201ENST00000444513 499 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC38Q502W7 RN7SL836P-201ENST00000476140 296 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 AC020779.1-201ENST00000478757 796 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 AC008410.1-201ENST00000483777 339 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 AC090958.1-201ENST00000511122 351 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 RNA5SP441-201ENST00000516809 88 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 OR4A17P-201ENST00000526032 904 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 MT1CP-201ENST00000567054 174 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 LINC00556-201ENST00000569603 412 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC38Q502W7 CBX3P2-202ENST00000583365 535 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 AC015911.5-201ENST00000587076 451 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 AP001823.1-201ENST00000604056 1003 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 AL135999.3-201ENST00000610501 812 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC38Q502W7 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 uc_338.29-201ENST00000615099 168 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 AL355974.3-201ENST00000617383 467 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 AL391262.2-201ENST00000622466 494 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC38Q502W7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC38Q502W7 AL121950.1-201ENST00000624993 2077 ntBASIC6.14□□□□□ -1.43
CCDC38Q502W7 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC38Q502W7 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC38Q502W7 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC38Q502W7 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC38Q502W7 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC38Q502W7 HSPA8P14-201ENST00000552265 1805 ntBASIC6.13□□□□□ -1.43
CCDC38Q502W7 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC38Q502W7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC38Q502W7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC38Q502W7 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC38Q502W7 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC38Q502W7 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC38Q502W7 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC38Q502W7 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCDC38Q502W7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC38Q502W7 RNU105B-201ENST00000364478 208 ntBASIC6.13□□□□□ -1.43
CCDC38Q502W7 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC38Q502W7 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC38Q502W7 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCDC38Q502W7 OOSP1-201ENST00000398992 1270 ntBASIC6.13□□□□□ -1.43
CCDC38Q502W7 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC38Q502W7 RNA5SP156-201ENST00000410250 110 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms