Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC005828.7-201ENST00000607331 556 ntBASIC3.73□□□□□ -1.81
RPL39P62891 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC3.73□□□□□ -1.81
RPL39P62891 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
RPL39P62891 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC3.73□□□□□ -1.81
RPL39P62891 AC087565.3-203ENST00000641018 837 ntBASIC3.73□□□□□ -1.81
RPL39P62891 AC119674.1-217ENST00000641942 1086 ntBASIC3.73□□□□□ -1.81
RPL39P62891 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
RPL39P62891 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC3.73□□□□□ -1.81
RPL39P62891 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC3.73□□□□□ -1.81
RPL39P62891 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 BX284613.1-201ENST00000452221 1641 ntBASIC3.73□□□□□ -1.81
RPL39P62891 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
RPL39P62891 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RPL39P62891 LCMT1-AS2-202ENST00000565214 5666 ntBASIC3.73□□□□□ -1.81
RPL39P62891 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RPL39P62891 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RPL39P62891 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RPL39P62891 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC3.72□□□□□ -1.81
RPL39P62891 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RPL39P62891 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RPL39P62891 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RPL39P62891 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RPL39P62891 MRRFP1-201ENST00000435941 1675 ntBASIC3.72□□□□□ -1.81
RPL39P62891 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RPL39P62891 AC023421.1-201ENST00000590535 1785 ntBASIC3.72□□□□□ -1.81
RPL39P62891 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RPL39P62891 COX6B1P3-201ENST00000312310 260 ntBASIC3.72□□□□□ -1.81
RPL39P62891 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
RPL39P62891 RN7SKP257-201ENST00000364525 309 ntBASIC3.72□□□□□ -1.81
RPL39P62891 RNA5SP131-201ENST00000365452 119 ntBASIC3.72□□□□□ -1.81
RPL39P62891 MIR551B-201ENST00000384984 96 ntBASIC3.72□□□□□ -1.81
RPL39P62891 AL078599.1-201ENST00000402075 293 ntBASIC3.72□□□□□ -1.81
RPL39P62891 AC007738.1-201ENST00000413892 348 ntBASIC3.72□□□□□ -1.81
RPL39P62891 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC3.72□□□□□ -1.81
RPL39P62891 AC117434.1-201ENST00000419971 836 ntBASIC3.72□□□□□ -1.81
RPL39P62891 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC3.72□□□□□ -1.81
RPL39P62891 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC3.72□□□□□ -1.81
RPL39P62891 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC3.72□□□□□ -1.81
RPL39P62891 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC3.72□□□□□ -1.81
RPL39P62891 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC3.72□□□□□ -1.81
RPL39P62891 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC3.72□□□□□ -1.81
RPL39P62891 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC3.72□□□□□ -1.81
RPL39P62891 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC3.72□□□□□ -1.81
RPL39P62891 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC3.72□□□□□ -1.81
RPL39P62891 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC3.72□□□□□ -1.81
RPL39P62891 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC3.72□□□□□ -1.81
RPL39P62891 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC3.72□□□□□ -1.81
RPL39P62891 RNA5SP103-201ENST00000459503 118 ntBASIC3.72□□□□□ -1.81
RPL39P62891 CBX1P5-201ENST00000475330 559 ntBASIC3.72□□□□□ -1.81
RPL39P62891 NACAP5-201ENST00000509863 636 ntBASIC3.72□□□□□ -1.81
RPL39P62891 RNU2-45P-201ENST00000516068 187 ntBASIC3.72□□□□□ -1.81
RPL39P62891 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC3.72□□□□□ -1.81
RPL39P62891 AP001284.1-201ENST00000528393 2118 ntBASIC3.72□□□□□ -1.81
RPL39P62891 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC3.72□□□□□ -1.81
RPL39P62891 BNIP3P1-201ENST00000547295 580 ntBASIC3.72□□□□□ -1.81
RPL39P62891 AC079905.1-201ENST00000549280 475 ntBASIC3.72□□□□□ -1.81
RPL39P62891 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC3.72□□□□□ -1.81
RPL39P62891 CDC42EP3P1-201ENST00000601004 764 ntBASIC3.72□□□□□ -1.81
RPL39P62891 AC011626.1-201ENST00000604710 562 ntBASIC3.72□□□□□ -1.81
RPL39P62891 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC3.72□□□□□ -1.81
RPL39P62891 RN7SL544P-201ENST00000617232 284 ntBASIC3.72□□□□□ -1.81
RPL39P62891 RN7SL763P-201ENST00000620922 284 ntBASIC3.72□□□□□ -1.81
RPL39P62891 OR8G3P-202ENST00000641572 1255 ntBASIC3.72□□□□□ -1.81
RPL39P62891 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RPL39P62891 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.72□□□□□ -1.81
RPL39P62891 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC3.72□□□□□ -1.81
RPL39P62891 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.72□□□□□ -1.81
RPL39P62891 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RPL39P62891 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RPL39P62891 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC3.72□□□□□ -1.81
RPL39P62891 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
RPL39P62891 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
RPL39P62891 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
RPL39P62891 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
RPL39P62891 AL022322.2-201ENST00000624072 20397 ntBASIC3.71□□□□□ -1.81
RPL39P62891 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
RPL39P62891 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
RPL39P62891 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
RPL39P62891 IFIT1P1-201ENST00000400497 1449 ntBASIC3.71□□□□□ -1.82
RPL39P62891 AC006484.1-201ENST00000435086 1884 ntBASIC3.71□□□□□ -1.82
RPL39P62891 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RPL39P62891 USP45-204ENST00000369233 2514 ntTSL 5 BASIC3.71□□□□□ -1.82
RPL39P62891 AP000542.2-201ENST00000623199 6179 ntBASIC3.71□□□□□ -1.82
RPL39P62891 AC083843.2-201ENST00000568248 6253 ntBASIC3.71□□□□□ -1.82
RPL39P62891 AMELX-201ENST00000348912 737 ntTSL 5 BASIC3.71□□□□□ -1.82
RPL39P62891 RNU1-150P-201ENST00000362491 162 ntBASIC3.71□□□□□ -1.82
RPL39P62891 RNU1-65P-201ENST00000363919 148 ntBASIC3.71□□□□□ -1.82
RPL39P62891 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RPL39P62891 SNORA16A-201ENST00000384342 137 ntBASIC3.71□□□□□ -1.82
RPL39P62891 MIR589-201ENST00000385238 99 ntBASIC3.71□□□□□ -1.82
RPL39P62891 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 206.8 ms